Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8859 | 26800;26801;26802 | chr2:178714083;178714082;178714081 | chr2:179578810;179578809;179578808 |
N2AB | 8542 | 25849;25850;25851 | chr2:178714083;178714082;178714081 | chr2:179578810;179578809;179578808 |
N2A | 7615 | 23068;23069;23070 | chr2:178714083;178714082;178714081 | chr2:179578810;179578809;179578808 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs1361604566 | -1.245 | 0.884 | N | 0.401 | 0.214 | 0.447311733946 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
L/I | rs1361604566 | -1.245 | 0.884 | N | 0.401 | 0.214 | 0.447311733946 | gnomAD-4.0.0 | 1.59159E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77331E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7502 | likely_pathogenic | 0.8109 | pathogenic | -2.168 | Highly Destabilizing | 0.998 | D | 0.716 | prob.delet. | None | None | None | None | I |
L/C | 0.8162 | likely_pathogenic | 0.8816 | pathogenic | -1.511 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
L/D | 0.9846 | likely_pathogenic | 0.989 | pathogenic | -1.588 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | I |
L/E | 0.9358 | likely_pathogenic | 0.9536 | pathogenic | -1.486 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
L/F | 0.4859 | ambiguous | 0.5319 | ambiguous | -1.396 | Destabilizing | 0.999 | D | 0.818 | deleterious | N | 0.510838832 | None | None | I |
L/G | 0.9243 | likely_pathogenic | 0.9486 | pathogenic | -2.612 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
L/H | 0.8691 | likely_pathogenic | 0.9086 | pathogenic | -1.839 | Destabilizing | 1.0 | D | 0.759 | deleterious | N | 0.488863243 | None | None | I |
L/I | 0.1428 | likely_benign | 0.1516 | benign | -0.955 | Destabilizing | 0.884 | D | 0.401 | neutral | N | 0.48186272 | None | None | I |
L/K | 0.8843 | likely_pathogenic | 0.9161 | pathogenic | -1.441 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
L/M | 0.2615 | likely_benign | 0.2938 | benign | -0.854 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | I |
L/N | 0.8996 | likely_pathogenic | 0.9264 | pathogenic | -1.401 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
L/P | 0.6085 | likely_pathogenic | 0.6528 | pathogenic | -1.332 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.379708639 | None | None | I |
L/Q | 0.7993 | likely_pathogenic | 0.8621 | pathogenic | -1.456 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | I |
L/R | 0.8051 | likely_pathogenic | 0.871 | pathogenic | -0.986 | Destabilizing | 1.0 | D | 0.817 | deleterious | N | 0.497003544 | None | None | I |
L/S | 0.9003 | likely_pathogenic | 0.9393 | pathogenic | -2.173 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
L/T | 0.7637 | likely_pathogenic | 0.8217 | pathogenic | -1.931 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | I |
L/V | 0.1874 | likely_benign | 0.215 | benign | -1.332 | Destabilizing | 0.981 | D | 0.597 | neutral | N | 0.471088366 | None | None | I |
L/W | 0.7868 | likely_pathogenic | 0.8408 | pathogenic | -1.539 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | I |
L/Y | 0.8073 | likely_pathogenic | 0.8481 | pathogenic | -1.302 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.