Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8860 | 26803;26804;26805 | chr2:178714080;178714079;178714078 | chr2:179578807;179578806;179578805 |
N2AB | 8543 | 25852;25853;25854 | chr2:178714080;178714079;178714078 | chr2:179578807;179578806;179578805 |
N2A | 7616 | 23071;23072;23073 | chr2:178714080;178714079;178714078 | chr2:179578807;179578806;179578805 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.014 | N | 0.291 | 0.173 | 0.240491677333 | gnomAD-4.0.0 | 1.59163E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85871E-06 | 0 | 0 |
S/N | rs1240256366 | None | 0.007 | N | 0.321 | 0.087 | 0.110078149338 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/N | rs1240256366 | None | 0.007 | N | 0.321 | 0.087 | 0.110078149338 | gnomAD-4.0.0 | 1.97184E-05 | None | None | None | None | N | None | 7.23903E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0736 | likely_benign | 0.0753 | benign | -0.507 | Destabilizing | None | N | 0.075 | neutral | None | None | None | None | N |
S/C | 0.1158 | likely_benign | 0.1369 | benign | -0.356 | Destabilizing | 0.196 | N | 0.411 | neutral | D | 0.522616217 | None | None | N |
S/D | 0.2502 | likely_benign | 0.2584 | benign | 0.227 | Stabilizing | 0.018 | N | 0.304 | neutral | None | None | None | None | N |
S/E | 0.2871 | likely_benign | 0.2877 | benign | 0.208 | Stabilizing | 0.018 | N | 0.295 | neutral | None | None | None | None | N |
S/F | 0.1118 | likely_benign | 0.1166 | benign | -0.827 | Destabilizing | None | N | 0.334 | neutral | None | None | None | None | N |
S/G | 0.0979 | likely_benign | 0.107 | benign | -0.721 | Destabilizing | 0.014 | N | 0.291 | neutral | N | 0.503498004 | None | None | N |
S/H | 0.1773 | likely_benign | 0.1794 | benign | -1.115 | Destabilizing | None | N | 0.267 | neutral | None | None | None | None | N |
S/I | 0.0815 | likely_benign | 0.0857 | benign | -0.057 | Destabilizing | None | N | 0.273 | neutral | N | 0.497544248 | None | None | N |
S/K | 0.2758 | likely_benign | 0.2837 | benign | -0.466 | Destabilizing | 0.009 | N | 0.271 | neutral | None | None | None | None | N |
S/L | 0.0701 | likely_benign | 0.072 | benign | -0.057 | Destabilizing | 0.004 | N | 0.337 | neutral | None | None | None | None | N |
S/M | 0.113 | likely_benign | 0.1239 | benign | -0.018 | Destabilizing | 0.138 | N | 0.436 | neutral | None | None | None | None | N |
S/N | 0.0829 | likely_benign | 0.0901 | benign | -0.361 | Destabilizing | 0.007 | N | 0.321 | neutral | N | 0.477630336 | None | None | N |
S/P | 0.4621 | ambiguous | 0.5012 | ambiguous | -0.173 | Destabilizing | 0.085 | N | 0.462 | neutral | None | None | None | None | N |
S/Q | 0.2543 | likely_benign | 0.2596 | benign | -0.453 | Destabilizing | 0.044 | N | 0.381 | neutral | None | None | None | None | N |
S/R | 0.2335 | likely_benign | 0.2414 | benign | -0.373 | Destabilizing | None | N | 0.201 | neutral | N | 0.478803772 | None | None | N |
S/T | 0.0535 | likely_benign | 0.0585 | benign | -0.396 | Destabilizing | None | N | 0.056 | neutral | N | 0.446421994 | None | None | N |
S/V | 0.101 | likely_benign | 0.1091 | benign | -0.173 | Destabilizing | None | N | 0.231 | neutral | None | None | None | None | N |
S/W | 0.2139 | likely_benign | 0.2454 | benign | -0.855 | Destabilizing | 0.788 | D | 0.521 | neutral | None | None | None | None | N |
S/Y | 0.1116 | likely_benign | 0.121 | benign | -0.557 | Destabilizing | 0.022 | N | 0.541 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.