Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8876 | 26851;26852;26853 | chr2:178714032;178714031;178714030 | chr2:179578759;179578758;179578757 |
N2AB | 8559 | 25900;25901;25902 | chr2:178714032;178714031;178714030 | chr2:179578759;179578758;179578757 |
N2A | 7632 | 23119;23120;23121 | chr2:178714032;178714031;178714030 | chr2:179578759;179578758;179578757 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1307074594 | -1.904 | 1.0 | N | 0.747 | 0.524 | 0.643332317526 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.7427 | likely_pathogenic | 0.8436 | pathogenic | -2.956 | Highly Destabilizing | 0.97 | D | 0.633 | neutral | None | None | None | None | N |
Y/C | 0.2152 | likely_benign | 0.2827 | benign | -1.986 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.496002813 | None | None | N |
Y/D | 0.6758 | likely_pathogenic | 0.8228 | pathogenic | -2.926 | Highly Destabilizing | 0.994 | D | 0.809 | deleterious | N | 0.512309869 | None | None | N |
Y/E | 0.8091 | likely_pathogenic | 0.8906 | pathogenic | -2.723 | Highly Destabilizing | 0.996 | D | 0.73 | prob.delet. | None | None | None | None | N |
Y/F | 0.1497 | likely_benign | 0.176 | benign | -1.094 | Destabilizing | 0.071 | N | 0.351 | neutral | D | 0.524111987 | None | None | N |
Y/G | 0.6791 | likely_pathogenic | 0.7881 | pathogenic | -3.391 | Highly Destabilizing | 0.996 | D | 0.76 | deleterious | None | None | None | None | N |
Y/H | 0.1894 | likely_benign | 0.2471 | benign | -1.987 | Destabilizing | 0.998 | D | 0.65 | neutral | N | 0.514012423 | None | None | N |
Y/I | 0.5442 | ambiguous | 0.6727 | pathogenic | -1.53 | Destabilizing | 0.991 | D | 0.705 | prob.neutral | None | None | None | None | N |
Y/K | 0.7345 | likely_pathogenic | 0.8061 | pathogenic | -2.152 | Highly Destabilizing | 0.991 | D | 0.735 | prob.delet. | None | None | None | None | N |
Y/L | 0.5367 | ambiguous | 0.6626 | pathogenic | -1.53 | Destabilizing | 0.942 | D | 0.6 | neutral | None | None | None | None | N |
Y/M | 0.6803 | likely_pathogenic | 0.7869 | pathogenic | -1.368 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
Y/N | 0.2721 | likely_benign | 0.3915 | ambiguous | -2.902 | Highly Destabilizing | 0.994 | D | 0.77 | deleterious | N | 0.519791834 | None | None | N |
Y/P | 0.9694 | likely_pathogenic | 0.9826 | pathogenic | -2.017 | Highly Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
Y/Q | 0.5877 | likely_pathogenic | 0.7118 | pathogenic | -2.632 | Highly Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
Y/R | 0.5409 | ambiguous | 0.6231 | pathogenic | -1.921 | Destabilizing | 0.996 | D | 0.767 | deleterious | None | None | None | None | N |
Y/S | 0.4536 | ambiguous | 0.5887 | pathogenic | -3.361 | Highly Destabilizing | 0.925 | D | 0.686 | prob.neutral | N | 0.502079199 | None | None | N |
Y/T | 0.5809 | likely_pathogenic | 0.7123 | pathogenic | -3.031 | Highly Destabilizing | 0.503 | D | 0.507 | neutral | None | None | None | None | N |
Y/V | 0.4512 | ambiguous | 0.5774 | pathogenic | -2.017 | Highly Destabilizing | 0.97 | D | 0.636 | neutral | None | None | None | None | N |
Y/W | 0.459 | ambiguous | 0.5304 | ambiguous | -0.452 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.