Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8886 | 26881;26882;26883 | chr2:178714002;178714001;178714000 | chr2:179578729;179578728;179578727 |
N2AB | 8569 | 25930;25931;25932 | chr2:178714002;178714001;178714000 | chr2:179578729;179578728;179578727 |
N2A | 7642 | 23149;23150;23151 | chr2:178714002;178714001;178714000 | chr2:179578729;179578728;179578727 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 0.801 | N | 0.683 | 0.299 | 0.261217442401 | gnomAD-4.0.0 | 2.40069E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62506E-06 | 0 | 0 |
G/S | rs72648991 | -1.142 | 0.233 | N | 0.269 | 0.188 | 0.156986980423 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
G/S | rs72648991 | -1.142 | 0.233 | N | 0.269 | 0.188 | 0.156986980423 | gnomAD-4.0.0 | 2.2582E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.7337E-04 | 2.69863E-05 | 1.1598E-05 | 1.65711E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0871 | likely_benign | 0.0931 | benign | -0.519 | Destabilizing | 0.454 | N | 0.544 | neutral | N | 0.444976413 | None | None | N |
G/C | 0.1408 | likely_benign | 0.1542 | benign | -0.958 | Destabilizing | 0.145 | N | 0.665 | neutral | N | 0.486228389 | None | None | N |
G/D | 0.4367 | ambiguous | 0.5001 | ambiguous | -1.491 | Destabilizing | 0.801 | D | 0.683 | prob.neutral | N | 0.440109311 | None | None | N |
G/E | 0.3044 | likely_benign | 0.3545 | ambiguous | -1.359 | Destabilizing | 0.842 | D | 0.684 | prob.neutral | None | None | None | None | N |
G/F | 0.4554 | ambiguous | 0.4968 | ambiguous | -0.575 | Destabilizing | 0.037 | N | 0.664 | neutral | None | None | None | None | N |
G/H | 0.3675 | ambiguous | 0.4015 | ambiguous | -1.655 | Destabilizing | 0.998 | D | 0.662 | neutral | None | None | None | None | N |
G/I | 0.1698 | likely_benign | 0.1934 | benign | 0.483 | Stabilizing | 0.949 | D | 0.686 | prob.neutral | None | None | None | None | N |
G/K | 0.4696 | ambiguous | 0.5247 | ambiguous | -0.838 | Destabilizing | 0.842 | D | 0.683 | prob.neutral | None | None | None | None | N |
G/L | 0.2785 | likely_benign | 0.3113 | benign | 0.483 | Stabilizing | 0.728 | D | 0.703 | prob.neutral | None | None | None | None | N |
G/M | 0.3064 | likely_benign | 0.3347 | benign | 0.134 | Stabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | N |
G/N | 0.3136 | likely_benign | 0.3439 | ambiguous | -0.947 | Destabilizing | 0.842 | D | 0.655 | neutral | None | None | None | None | N |
G/P | 0.9672 | likely_pathogenic | 0.9734 | pathogenic | 0.195 | Stabilizing | 0.974 | D | 0.673 | neutral | None | None | None | None | N |
G/Q | 0.3202 | likely_benign | 0.3623 | ambiguous | -0.814 | Destabilizing | 0.974 | D | 0.68 | prob.neutral | None | None | None | None | N |
G/R | 0.3183 | likely_benign | 0.3629 | ambiguous | -1.024 | Destabilizing | 0.986 | D | 0.68 | prob.neutral | N | 0.433047265 | None | None | N |
G/S | 0.0782 | likely_benign | 0.0824 | benign | -1.332 | Destabilizing | 0.233 | N | 0.269 | neutral | N | 0.353103615 | None | None | N |
G/T | 0.1 | likely_benign | 0.1034 | benign | -1.075 | Destabilizing | 0.067 | N | 0.497 | neutral | None | None | None | None | N |
G/V | 0.1248 | likely_benign | 0.1441 | benign | 0.195 | Stabilizing | 0.669 | D | 0.707 | prob.neutral | N | 0.419368679 | None | None | N |
G/W | 0.3834 | ambiguous | 0.4342 | ambiguous | -1.31 | Destabilizing | 0.998 | D | 0.675 | prob.neutral | None | None | None | None | N |
G/Y | 0.3518 | ambiguous | 0.4138 | ambiguous | -0.679 | Destabilizing | 0.904 | D | 0.705 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.