Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8892 | 26899;26900;26901 | chr2:178713984;178713983;178713982 | chr2:179578711;179578710;179578709 |
N2AB | 8575 | 25948;25949;25950 | chr2:178713984;178713983;178713982 | chr2:179578711;179578710;179578709 |
N2A | 7648 | 23167;23168;23169 | chr2:178713984;178713983;178713982 | chr2:179578711;179578710;179578709 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs747832107 | -0.491 | 0.042 | D | 0.447 | 0.119 | 0.342631996419 | gnomAD-2.1.1 | 6.43E-05 | None | None | None | None | N | None | 0 | 5.10204E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs747832107 | -0.491 | 0.042 | D | 0.447 | 0.119 | 0.342631996419 | gnomAD-3.1.2 | 8.54E-05 | None | None | None | None | N | None | 0 | 8.51566E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs747832107 | -0.491 | 0.042 | D | 0.447 | 0.119 | 0.342631996419 | gnomAD-4.0.0 | 3.844E-05 | None | None | None | None | N | None | 0 | 4.74737E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 1.34052E-05 | 2.84544E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0999 | likely_benign | 0.1033 | benign | -1.864 | Destabilizing | None | N | 0.17 | neutral | N | 0.450174376 | None | None | N |
V/C | 0.7471 | likely_pathogenic | 0.7869 | pathogenic | -2.485 | Highly Destabilizing | 0.667 | D | 0.625 | neutral | None | None | None | None | N |
V/D | 0.8807 | likely_pathogenic | 0.9079 | pathogenic | -3.58 | Highly Destabilizing | 0.22 | N | 0.637 | neutral | None | None | None | None | N |
V/E | 0.8663 | likely_pathogenic | 0.8988 | pathogenic | -3.478 | Highly Destabilizing | 0.175 | N | 0.557 | neutral | D | 0.548018762 | None | None | N |
V/F | 0.6223 | likely_pathogenic | 0.7073 | pathogenic | -1.341 | Destabilizing | 0.22 | N | 0.638 | neutral | None | None | None | None | N |
V/G | 0.3241 | likely_benign | 0.362 | ambiguous | -2.225 | Highly Destabilizing | 0.042 | N | 0.511 | neutral | N | 0.521520716 | None | None | N |
V/H | 0.948 | likely_pathogenic | 0.967 | pathogenic | -1.675 | Destabilizing | 0.859 | D | 0.659 | neutral | None | None | None | None | N |
V/I | 0.1169 | likely_benign | 0.1359 | benign | -0.901 | Destabilizing | 0.042 | N | 0.447 | neutral | D | 0.52538421 | None | None | N |
V/K | 0.918 | likely_pathogenic | 0.945 | pathogenic | -1.878 | Destabilizing | 0.22 | N | 0.553 | neutral | None | None | None | None | N |
V/L | 0.3894 | ambiguous | 0.488 | ambiguous | -0.901 | Destabilizing | None | N | 0.222 | neutral | D | 0.523232126 | None | None | N |
V/M | 0.3152 | likely_benign | 0.3995 | ambiguous | -1.242 | Destabilizing | 0.004 | N | 0.377 | neutral | None | None | None | None | N |
V/N | 0.7294 | likely_pathogenic | 0.7864 | pathogenic | -2.286 | Highly Destabilizing | 0.22 | N | 0.655 | neutral | None | None | None | None | N |
V/P | 0.7451 | likely_pathogenic | 0.8258 | pathogenic | -1.197 | Destabilizing | 0.364 | N | 0.633 | neutral | None | None | None | None | N |
V/Q | 0.8712 | likely_pathogenic | 0.9041 | pathogenic | -2.377 | Highly Destabilizing | 0.364 | N | 0.657 | neutral | None | None | None | None | N |
V/R | 0.8744 | likely_pathogenic | 0.9018 | pathogenic | -1.414 | Destabilizing | 0.22 | N | 0.674 | neutral | None | None | None | None | N |
V/S | 0.2653 | likely_benign | 0.2917 | benign | -2.673 | Highly Destabilizing | 0.005 | N | 0.467 | neutral | None | None | None | None | N |
V/T | 0.1477 | likely_benign | 0.1597 | benign | -2.459 | Highly Destabilizing | 0.002 | N | 0.184 | neutral | None | None | None | None | N |
V/W | 0.9843 | likely_pathogenic | 0.9934 | pathogenic | -1.71 | Destabilizing | 0.958 | D | 0.632 | neutral | None | None | None | None | N |
V/Y | 0.9341 | likely_pathogenic | 0.961 | pathogenic | -1.392 | Destabilizing | 0.667 | D | 0.661 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.