Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8897 | 26914;26915;26916 | chr2:178713969;178713968;178713967 | chr2:179578696;179578695;179578694 |
N2AB | 8580 | 25963;25964;25965 | chr2:178713969;178713968;178713967 | chr2:179578696;179578695;179578694 |
N2A | 7653 | 23182;23183;23184 | chr2:178713969;178713968;178713967 | chr2:179578696;179578695;179578694 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 1.0 | N | 0.834 | 0.585 | 0.474168873855 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31253E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0759 | likely_benign | 0.0751 | benign | -0.718 | Destabilizing | 0.998 | D | 0.473 | neutral | None | None | None | None | N |
S/C | 0.1268 | likely_benign | 0.1174 | benign | -0.413 | Destabilizing | 1.0 | D | 0.834 | deleterious | N | 0.506727235 | None | None | N |
S/D | 0.3386 | likely_benign | 0.4142 | ambiguous | 0.129 | Stabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
S/E | 0.3982 | ambiguous | 0.4396 | ambiguous | 0.074 | Stabilizing | 0.999 | D | 0.556 | neutral | None | None | None | None | N |
S/F | 0.2403 | likely_benign | 0.2633 | benign | -1.166 | Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
S/G | 0.0783 | likely_benign | 0.0843 | benign | -0.888 | Destabilizing | 0.999 | D | 0.532 | neutral | N | 0.486697196 | None | None | N |
S/H | 0.3296 | likely_benign | 0.3395 | benign | -1.413 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
S/I | 0.1631 | likely_benign | 0.1773 | benign | -0.384 | Destabilizing | 1.0 | D | 0.864 | deleterious | N | 0.504574414 | None | None | N |
S/K | 0.4329 | ambiguous | 0.4425 | ambiguous | -0.518 | Destabilizing | 0.999 | D | 0.554 | neutral | None | None | None | None | N |
S/L | 0.109 | likely_benign | 0.1142 | benign | -0.384 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
S/M | 0.197 | likely_benign | 0.2048 | benign | 0.004 | Stabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
S/N | 0.1366 | likely_benign | 0.1567 | benign | -0.322 | Destabilizing | 0.999 | D | 0.554 | neutral | N | 0.497306259 | None | None | N |
S/P | 0.6935 | likely_pathogenic | 0.7428 | pathogenic | -0.465 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
S/Q | 0.3989 | ambiguous | 0.407 | ambiguous | -0.572 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
S/R | 0.3201 | likely_benign | 0.3219 | benign | -0.364 | Destabilizing | 1.0 | D | 0.85 | deleterious | N | 0.492862487 | None | None | N |
S/T | 0.0821 | likely_benign | 0.0916 | benign | -0.454 | Destabilizing | 0.999 | D | 0.502 | neutral | N | 0.514993858 | None | None | N |
S/V | 0.1891 | likely_benign | 0.2078 | benign | -0.465 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
S/W | 0.378 | ambiguous | 0.4157 | ambiguous | -1.09 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
S/Y | 0.2194 | likely_benign | 0.2347 | benign | -0.835 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.