Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8930 | 27013;27014;27015 | chr2:178713346;178713345;178713344 | chr2:179578073;179578072;179578071 |
N2AB | 8613 | 26062;26063;26064 | chr2:178713346;178713345;178713344 | chr2:179578073;179578072;179578071 |
N2A | 7686 | 23281;23282;23283 | chr2:178713346;178713345;178713344 | chr2:179578073;179578072;179578071 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.896 | N | 0.497 | 0.382 | 0.556540827966 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
R/T | rs1206653316 | 0.102 | 0.896 | N | 0.535 | 0.284 | 0.415313616471 | gnomAD-2.1.1 | 3.2E-05 | None | None | None | None | N | None | 1.1489E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/T | rs1206653316 | 0.102 | 0.896 | N | 0.535 | 0.284 | 0.415313616471 | gnomAD-3.1.2 | 6.61E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/T | rs1206653316 | 0.102 | 0.896 | N | 0.535 | 0.284 | 0.415313616471 | gnomAD-4.0.0 | 3.04786E-06 | None | None | None | None | N | None | 3.50238E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20516E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.682 | likely_pathogenic | 0.7501 | pathogenic | -0.142 | Destabilizing | 0.919 | D | 0.532 | neutral | None | None | None | None | N |
R/C | 0.3372 | likely_benign | 0.4154 | ambiguous | -0.103 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
R/D | 0.881 | likely_pathogenic | 0.9213 | pathogenic | -0.014 | Destabilizing | 0.976 | D | 0.54 | neutral | None | None | None | None | N |
R/E | 0.5429 | ambiguous | 0.6399 | pathogenic | 0.073 | Stabilizing | 0.851 | D | 0.513 | neutral | None | None | None | None | N |
R/F | 0.7883 | likely_pathogenic | 0.8342 | pathogenic | -0.18 | Destabilizing | 0.996 | D | 0.623 | neutral | None | None | None | None | N |
R/G | 0.4532 | ambiguous | 0.5201 | ambiguous | -0.395 | Destabilizing | 0.896 | D | 0.497 | neutral | N | 0.484326885 | None | None | N |
R/H | 0.1866 | likely_benign | 0.2275 | benign | -0.871 | Destabilizing | 0.996 | D | 0.547 | neutral | None | None | None | None | N |
R/I | 0.5265 | ambiguous | 0.6119 | pathogenic | 0.506 | Stabilizing | 0.984 | D | 0.631 | neutral | N | 0.488479261 | None | None | N |
R/K | 0.1235 | likely_benign | 0.1523 | benign | -0.18 | Destabilizing | 0.011 | N | 0.173 | neutral | N | 0.43104711 | None | None | N |
R/L | 0.4906 | ambiguous | 0.5715 | pathogenic | 0.506 | Stabilizing | 0.919 | D | 0.497 | neutral | None | None | None | None | N |
R/M | 0.498 | ambiguous | 0.5758 | pathogenic | 0.112 | Stabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
R/N | 0.8392 | likely_pathogenic | 0.889 | pathogenic | 0.238 | Stabilizing | 0.976 | D | 0.518 | neutral | None | None | None | None | N |
R/P | 0.9564 | likely_pathogenic | 0.9628 | pathogenic | 0.312 | Stabilizing | 0.988 | D | 0.613 | neutral | None | None | None | None | N |
R/Q | 0.1488 | likely_benign | 0.176 | benign | 0.095 | Stabilizing | 0.976 | D | 0.548 | neutral | None | None | None | None | N |
R/S | 0.7464 | likely_pathogenic | 0.8142 | pathogenic | -0.237 | Destabilizing | 0.896 | D | 0.554 | neutral | N | 0.476088754 | None | None | N |
R/T | 0.5401 | ambiguous | 0.6283 | pathogenic | 0.002 | Stabilizing | 0.896 | D | 0.535 | neutral | N | 0.4429949 | None | None | N |
R/V | 0.5874 | likely_pathogenic | 0.6598 | pathogenic | 0.312 | Stabilizing | 0.988 | D | 0.621 | neutral | None | None | None | None | N |
R/W | 0.2534 | likely_benign | 0.2891 | benign | -0.086 | Destabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | N |
R/Y | 0.6115 | likely_pathogenic | 0.6754 | pathogenic | 0.28 | Stabilizing | 0.996 | D | 0.615 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.