Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8962 | 27109;27110;27111 | chr2:178713250;178713249;178713248 | chr2:179577977;179577976;179577975 |
N2AB | 8645 | 26158;26159;26160 | chr2:178713250;178713249;178713248 | chr2:179577977;179577976;179577975 |
N2A | 7718 | 23377;23378;23379 | chr2:178713250;178713249;178713248 | chr2:179577977;179577976;179577975 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs2076925397 | None | None | N | 0.101 | 0.117 | 0.0611884634855 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs2076925397 | None | None | N | 0.101 | 0.117 | 0.0611884634855 | gnomAD-4.0.0 | 6.57263E-06 | None | None | None | None | N | None | 0 | 6.55136E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/V | None | None | 0.055 | N | 0.425 | 0.098 | 0.316788114976 | gnomAD-4.0.0 | 3.18641E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.4108E-04 | 2.86113E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1208 | likely_benign | 0.1225 | benign | -0.611 | Destabilizing | 0.012 | N | 0.327 | neutral | N | 0.475140951 | None | None | N |
E/C | 0.6197 | likely_pathogenic | 0.6065 | pathogenic | -0.058 | Destabilizing | 0.864 | D | 0.343 | neutral | None | None | None | None | N |
E/D | 0.0959 | likely_benign | 0.0853 | benign | -0.482 | Destabilizing | None | N | 0.101 | neutral | N | 0.348286001 | None | None | N |
E/F | 0.6316 | likely_pathogenic | 0.6281 | pathogenic | -0.498 | Destabilizing | 0.628 | D | 0.368 | neutral | None | None | None | None | N |
E/G | 0.0708 | likely_benign | 0.0733 | benign | -0.84 | Destabilizing | None | N | 0.165 | neutral | N | 0.436889207 | None | None | N |
E/H | 0.2615 | likely_benign | 0.2479 | benign | -0.449 | Destabilizing | 0.356 | N | 0.287 | neutral | None | None | None | None | N |
E/I | 0.4448 | ambiguous | 0.4863 | ambiguous | -0.029 | Destabilizing | 0.356 | N | 0.396 | neutral | None | None | None | None | N |
E/K | 0.0769 | likely_benign | 0.0907 | benign | 0.036 | Stabilizing | None | N | 0.121 | neutral | N | 0.458363345 | None | None | N |
E/L | 0.3342 | likely_benign | 0.3515 | ambiguous | -0.029 | Destabilizing | 0.072 | N | 0.447 | neutral | None | None | None | None | N |
E/M | 0.375 | ambiguous | 0.401 | ambiguous | 0.272 | Stabilizing | 0.628 | D | 0.339 | neutral | None | None | None | None | N |
E/N | 0.1305 | likely_benign | 0.1148 | benign | -0.215 | Destabilizing | None | N | 0.111 | neutral | None | None | None | None | N |
E/P | 0.8174 | likely_pathogenic | 0.8215 | pathogenic | -0.203 | Destabilizing | 0.136 | N | 0.415 | neutral | None | None | None | None | N |
E/Q | 0.0887 | likely_benign | 0.0884 | benign | -0.177 | Destabilizing | 0.029 | N | 0.263 | neutral | N | 0.47531431 | None | None | N |
E/R | 0.116 | likely_benign | 0.1151 | benign | 0.238 | Stabilizing | 0.038 | N | 0.229 | neutral | None | None | None | None | N |
E/S | 0.1305 | likely_benign | 0.1248 | benign | -0.426 | Destabilizing | 0.016 | N | 0.175 | neutral | None | None | None | None | N |
E/T | 0.235 | likely_benign | 0.2663 | benign | -0.244 | Destabilizing | 0.031 | N | 0.339 | neutral | None | None | None | None | N |
E/V | 0.2769 | likely_benign | 0.3053 | benign | -0.203 | Destabilizing | 0.055 | N | 0.425 | neutral | N | 0.485800662 | None | None | N |
E/W | 0.7498 | likely_pathogenic | 0.7502 | pathogenic | -0.332 | Destabilizing | 0.864 | D | 0.362 | neutral | None | None | None | None | N |
E/Y | 0.4349 | ambiguous | 0.4313 | ambiguous | -0.261 | Destabilizing | 0.628 | D | 0.362 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.