Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8963 | 27112;27113;27114 | chr2:178713247;178713246;178713245 | chr2:179577974;179577973;179577972 |
N2AB | 8646 | 26161;26162;26163 | chr2:178713247;178713246;178713245 | chr2:179577974;179577973;179577972 |
N2A | 7719 | 23380;23381;23382 | chr2:178713247;178713246;178713245 | chr2:179577974;179577973;179577972 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | rs1225996636 | -0.296 | 0.015 | D | 0.403 | 0.438 | 0.550675598306 | gnomAD-4.0.0 | 1.59306E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86095E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2069 | likely_benign | 0.2418 | benign | -0.423 | Destabilizing | 0.334 | N | 0.351 | neutral | N | 0.495091672 | None | None | N |
G/C | 0.3283 | likely_benign | 0.3906 | ambiguous | -0.888 | Destabilizing | 0.982 | D | 0.653 | neutral | None | None | None | None | N |
G/D | 0.1427 | likely_benign | 0.1657 | benign | -0.639 | Destabilizing | 0.539 | D | 0.436 | neutral | None | None | None | None | N |
G/E | 0.1286 | likely_benign | 0.1523 | benign | -0.78 | Destabilizing | 0.015 | N | 0.332 | neutral | N | 0.484505381 | None | None | N |
G/F | 0.6688 | likely_pathogenic | 0.7275 | pathogenic | -1.018 | Destabilizing | 0.826 | D | 0.635 | neutral | None | None | None | None | N |
G/H | 0.3151 | likely_benign | 0.3412 | ambiguous | -0.662 | Destabilizing | 0.947 | D | 0.525 | neutral | None | None | None | None | N |
G/I | 0.434 | ambiguous | 0.5096 | ambiguous | -0.454 | Destabilizing | 0.539 | D | 0.627 | neutral | None | None | None | None | N |
G/K | 0.1867 | likely_benign | 0.2055 | benign | -0.967 | Destabilizing | 0.539 | D | 0.467 | neutral | None | None | None | None | N |
G/L | 0.5454 | ambiguous | 0.5951 | pathogenic | -0.454 | Destabilizing | 0.539 | D | 0.587 | neutral | None | None | None | None | N |
G/M | 0.4828 | ambiguous | 0.544 | ambiguous | -0.52 | Destabilizing | 0.947 | D | 0.629 | neutral | None | None | None | None | N |
G/N | 0.1877 | likely_benign | 0.219 | benign | -0.618 | Destabilizing | 0.7 | D | 0.463 | neutral | None | None | None | None | N |
G/P | 0.9203 | likely_pathogenic | 0.9271 | pathogenic | -0.408 | Destabilizing | 0.826 | D | 0.517 | neutral | None | None | None | None | N |
G/Q | 0.1871 | likely_benign | 0.2033 | benign | -0.878 | Destabilizing | 0.7 | D | 0.518 | neutral | None | None | None | None | N |
G/R | 0.1639 | likely_benign | 0.1781 | benign | -0.503 | Destabilizing | 0.008 | N | 0.295 | neutral | N | 0.50109238 | None | None | N |
G/S | 0.1345 | likely_benign | 0.1557 | benign | -0.786 | Destabilizing | 0.399 | N | 0.419 | neutral | None | None | None | None | N |
G/T | 0.234 | likely_benign | 0.2662 | benign | -0.852 | Destabilizing | 0.7 | D | 0.482 | neutral | None | None | None | None | N |
G/V | 0.3387 | likely_benign | 0.3991 | ambiguous | -0.408 | Destabilizing | 0.015 | N | 0.403 | neutral | D | 0.526553696 | None | None | N |
G/W | 0.3879 | ambiguous | 0.424 | ambiguous | -1.204 | Destabilizing | 0.982 | D | 0.562 | neutral | None | None | None | None | N |
G/Y | 0.4291 | ambiguous | 0.4926 | ambiguous | -0.852 | Destabilizing | 0.826 | D | 0.633 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.