Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8980 | 27163;27164;27165 | chr2:178713196;178713195;178713194 | chr2:179577923;179577922;179577921 |
N2AB | 8663 | 26212;26213;26214 | chr2:178713196;178713195;178713194 | chr2:179577923;179577922;179577921 |
N2A | 7736 | 23431;23432;23433 | chr2:178713196;178713195;178713194 | chr2:179577923;179577922;179577921 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs777824582 | 0.441 | 0.016 | N | 0.323 | 0.236 | 0.486352402194 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.55E-05 | None | 0 | 0 | 0 |
T/I | rs777824582 | 0.441 | 0.016 | N | 0.323 | 0.236 | 0.486352402194 | gnomAD-4.0.0 | 6.15831E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99497E-07 | 8.11764E-05 | 1.65667E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1042 | likely_benign | 0.111 | benign | -0.384 | Destabilizing | 0.002 | N | 0.146 | neutral | N | 0.503910073 | None | None | N |
T/C | 0.4831 | ambiguous | 0.4947 | ambiguous | -0.421 | Destabilizing | 0.992 | D | 0.542 | neutral | None | None | None | None | N |
T/D | 0.5865 | likely_pathogenic | 0.6027 | pathogenic | -1.53 | Destabilizing | 0.617 | D | 0.544 | neutral | None | None | None | None | N |
T/E | 0.542 | ambiguous | 0.5513 | ambiguous | -1.524 | Destabilizing | 0.617 | D | 0.523 | neutral | None | None | None | None | N |
T/F | 0.2509 | likely_benign | 0.2551 | benign | -0.674 | Destabilizing | 0.92 | D | 0.598 | neutral | None | None | None | None | N |
T/G | 0.3908 | ambiguous | 0.3962 | ambiguous | -0.624 | Destabilizing | 0.447 | N | 0.537 | neutral | None | None | None | None | N |
T/H | 0.2813 | likely_benign | 0.286 | benign | -1.115 | Destabilizing | 0.977 | D | 0.569 | neutral | None | None | None | None | N |
T/I | 0.1363 | likely_benign | 0.1365 | benign | 0.162 | Stabilizing | 0.016 | N | 0.323 | neutral | N | 0.458137711 | None | None | N |
T/K | 0.3102 | likely_benign | 0.3151 | benign | -0.681 | Destabilizing | 0.447 | N | 0.544 | neutral | None | None | None | None | N |
T/L | 0.1172 | likely_benign | 0.1129 | benign | 0.162 | Stabilizing | 0.25 | N | 0.476 | neutral | None | None | None | None | N |
T/M | 0.1008 | likely_benign | 0.1041 | benign | 0.584 | Stabilizing | 0.92 | D | 0.557 | neutral | None | None | None | None | N |
T/N | 0.1688 | likely_benign | 0.1784 | benign | -0.923 | Destabilizing | 0.379 | N | 0.517 | neutral | N | 0.47680083 | None | None | N |
T/P | 0.6961 | likely_pathogenic | 0.7255 | pathogenic | 0.012 | Stabilizing | 0.896 | D | 0.573 | neutral | N | 0.484935996 | None | None | N |
T/Q | 0.3414 | ambiguous | 0.3437 | ambiguous | -1.184 | Destabilizing | 0.85 | D | 0.579 | neutral | None | None | None | None | N |
T/R | 0.2235 | likely_benign | 0.2293 | benign | -0.405 | Destabilizing | 0.85 | D | 0.573 | neutral | None | None | None | None | N |
T/S | 0.1348 | likely_benign | 0.1377 | benign | -0.897 | Destabilizing | 0.007 | N | 0.143 | neutral | N | 0.453115893 | None | None | N |
T/V | 0.1246 | likely_benign | 0.1213 | benign | 0.012 | Stabilizing | 0.25 | N | 0.47 | neutral | None | None | None | None | N |
T/W | 0.6565 | likely_pathogenic | 0.6775 | pathogenic | -0.773 | Destabilizing | 0.992 | D | 0.595 | neutral | None | None | None | None | N |
T/Y | 0.2895 | likely_benign | 0.3025 | benign | -0.412 | Destabilizing | 0.972 | D | 0.614 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.