Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8988 | 27187;27188;27189 | chr2:178713172;178713171;178713170 | chr2:179577899;179577898;179577897 |
N2AB | 8671 | 26236;26237;26238 | chr2:178713172;178713171;178713170 | chr2:179577899;179577898;179577897 |
N2A | 7744 | 23455;23456;23457 | chr2:178713172;178713171;178713170 | chr2:179577899;179577898;179577897 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | rs2076915849 | None | 0.971 | D | 0.573 | 0.284 | 0.583928190899 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/M | rs2076915849 | None | 0.971 | D | 0.573 | 0.284 | 0.583928190899 | gnomAD-4.0.0 | 6.57471E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4702E-05 | 0 | 0 |
L/P | rs2076915544 | None | 0.032 | N | 0.486 | 0.447 | 0.714032942311 | gnomAD-4.0.0 | 3.18277E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.54754E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.536 | ambiguous | 0.6091 | pathogenic | -1.994 | Destabilizing | 0.754 | D | 0.461 | neutral | None | None | None | None | N |
L/C | 0.8448 | likely_pathogenic | 0.8836 | pathogenic | -2.58 | Highly Destabilizing | 0.998 | D | 0.565 | neutral | None | None | None | None | N |
L/D | 0.992 | likely_pathogenic | 0.9939 | pathogenic | -3.19 | Highly Destabilizing | 0.956 | D | 0.673 | neutral | None | None | None | None | N |
L/E | 0.9543 | likely_pathogenic | 0.9625 | pathogenic | -3.116 | Highly Destabilizing | 0.956 | D | 0.67 | neutral | None | None | None | None | N |
L/F | 0.7074 | likely_pathogenic | 0.7766 | pathogenic | -1.538 | Destabilizing | 0.978 | D | 0.601 | neutral | None | None | None | None | N |
L/G | 0.9128 | likely_pathogenic | 0.9253 | pathogenic | -2.318 | Highly Destabilizing | 0.956 | D | 0.666 | neutral | None | None | None | None | N |
L/H | 0.9474 | likely_pathogenic | 0.9636 | pathogenic | -1.497 | Destabilizing | 0.998 | D | 0.651 | neutral | None | None | None | None | N |
L/I | 0.1775 | likely_benign | 0.2055 | benign | -1.118 | Destabilizing | 0.754 | D | 0.485 | neutral | None | None | None | None | N |
L/K | 0.956 | likely_pathogenic | 0.966 | pathogenic | -1.801 | Destabilizing | 0.956 | D | 0.619 | neutral | None | None | None | None | N |
L/M | 0.2632 | likely_benign | 0.2926 | benign | -1.452 | Destabilizing | 0.971 | D | 0.573 | neutral | D | 0.525421496 | None | None | N |
L/N | 0.948 | likely_pathogenic | 0.9532 | pathogenic | -2.107 | Highly Destabilizing | 0.978 | D | 0.683 | prob.neutral | None | None | None | None | N |
L/P | 0.7108 | likely_pathogenic | 0.7545 | pathogenic | -1.388 | Destabilizing | 0.032 | N | 0.486 | neutral | N | 0.478630413 | None | None | N |
L/Q | 0.8532 | likely_pathogenic | 0.8844 | pathogenic | -2.29 | Highly Destabilizing | 0.971 | D | 0.621 | neutral | N | 0.500090963 | None | None | N |
L/R | 0.8939 | likely_pathogenic | 0.926 | pathogenic | -1.232 | Destabilizing | 0.971 | D | 0.611 | neutral | N | 0.488734657 | None | None | N |
L/S | 0.8588 | likely_pathogenic | 0.8896 | pathogenic | -2.602 | Highly Destabilizing | 0.956 | D | 0.618 | neutral | None | None | None | None | N |
L/T | 0.5 | ambiguous | 0.5498 | ambiguous | -2.413 | Highly Destabilizing | 0.86 | D | 0.597 | neutral | None | None | None | None | N |
L/V | 0.1542 | likely_benign | 0.1779 | benign | -1.388 | Destabilizing | 0.058 | N | 0.29 | neutral | N | 0.380671431 | None | None | N |
L/W | 0.9149 | likely_pathogenic | 0.9369 | pathogenic | -1.698 | Destabilizing | 0.998 | D | 0.581 | neutral | None | None | None | None | N |
L/Y | 0.9549 | likely_pathogenic | 0.9687 | pathogenic | -1.413 | Destabilizing | 0.993 | D | 0.591 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.