Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9012 | 27259;27260;27261 | chr2:178713100;178713099;178713098 | chr2:179577827;179577826;179577825 |
N2AB | 8695 | 26308;26309;26310 | chr2:178713100;178713099;178713098 | chr2:179577827;179577826;179577825 |
N2A | 7768 | 23527;23528;23529 | chr2:178713100;178713099;178713098 | chr2:179577827;179577826;179577825 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs765386562 | None | None | N | 0.154 | 0.115 | 0.0920862733494 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0558 | likely_benign | 0.0564 | benign | -1.263 | Destabilizing | None | N | 0.164 | neutral | N | 0.411767916 | None | None | N |
P/C | 0.2545 | likely_benign | 0.2581 | benign | -0.957 | Destabilizing | 0.245 | N | 0.6 | neutral | None | None | None | None | N |
P/D | 0.2236 | likely_benign | 0.2597 | benign | -1.29 | Destabilizing | 0.009 | N | 0.475 | neutral | None | None | None | None | N |
P/E | 0.1484 | likely_benign | 0.1637 | benign | -1.356 | Destabilizing | 0.009 | N | 0.421 | neutral | None | None | None | None | N |
P/F | 0.1565 | likely_benign | 0.1587 | benign | -1.295 | Destabilizing | None | N | 0.395 | neutral | None | None | None | None | N |
P/G | 0.1649 | likely_benign | 0.1825 | benign | -1.493 | Destabilizing | 0.004 | N | 0.384 | neutral | None | None | None | None | N |
P/H | 0.0799 | likely_benign | 0.078 | benign | -1.001 | Destabilizing | 0.108 | N | 0.599 | neutral | N | 0.401590995 | None | None | N |
P/I | 0.1193 | likely_benign | 0.1257 | benign | -0.762 | Destabilizing | 0.009 | N | 0.495 | neutral | None | None | None | None | N |
P/K | 0.1051 | likely_benign | 0.1092 | benign | -0.903 | Destabilizing | None | N | 0.174 | neutral | None | None | None | None | N |
P/L | 0.0657 | likely_benign | 0.0694 | benign | -0.762 | Destabilizing | 0.003 | N | 0.391 | neutral | N | 0.423331704 | None | None | N |
P/M | 0.1579 | likely_benign | 0.1624 | benign | -0.536 | Destabilizing | 0.245 | N | 0.604 | neutral | None | None | None | None | N |
P/N | 0.1414 | likely_benign | 0.1499 | benign | -0.683 | Destabilizing | 0.022 | N | 0.581 | neutral | None | None | None | None | N |
P/Q | 0.0818 | likely_benign | 0.0812 | benign | -0.989 | Destabilizing | 0.044 | N | 0.553 | neutral | None | None | None | None | N |
P/R | 0.0724 | likely_benign | 0.0687 | benign | -0.319 | Destabilizing | 0.017 | N | 0.575 | neutral | N | 0.384832031 | None | None | N |
P/S | 0.0676 | likely_benign | 0.0705 | benign | -1.127 | Destabilizing | None | N | 0.154 | neutral | N | 0.354546409 | None | None | N |
P/T | 0.0651 | likely_benign | 0.07 | benign | -1.095 | Destabilizing | None | N | 0.172 | neutral | N | 0.328938676 | None | None | N |
P/V | 0.0992 | likely_benign | 0.1007 | benign | -0.894 | Destabilizing | None | N | 0.249 | neutral | None | None | None | None | N |
P/W | 0.2657 | likely_benign | 0.2788 | benign | -1.378 | Destabilizing | 0.245 | N | 0.585 | neutral | None | None | None | None | N |
P/Y | 0.1512 | likely_benign | 0.1546 | benign | -1.075 | Destabilizing | None | N | 0.401 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.