Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9029 | 27310;27311;27312 | chr2:178712940;178712939;178712938 | chr2:179577667;179577666;179577665 |
N2AB | 8712 | 26359;26360;26361 | chr2:178712940;178712939;178712938 | chr2:179577667;179577666;179577665 |
N2A | 7785 | 23578;23579;23580 | chr2:178712940;178712939;178712938 | chr2:179577667;179577666;179577665 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs1336740450 | -0.051 | 0.669 | N | 0.343 | 0.337 | 0.265010934533 | gnomAD-2.1.1 | 6.37E-05 | None | None | None | None | N | None | 2.29621E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/G | rs1336740450 | -0.051 | 0.669 | N | 0.343 | 0.337 | 0.265010934533 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07211E-04 | 0 |
D/G | rs1336740450 | -0.051 | 0.669 | N | 0.343 | 0.337 | 0.265010934533 | gnomAD-4.0.0 | 4.05966E-06 | None | None | None | None | N | None | 5.24054E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.69792E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1301 | likely_benign | 0.1505 | benign | -0.372 | Destabilizing | 0.801 | D | 0.362 | neutral | N | 0.445341772 | None | None | N |
D/C | 0.6074 | likely_pathogenic | 0.6678 | pathogenic | -0.228 | Destabilizing | 0.998 | D | 0.439 | neutral | None | None | None | None | N |
D/E | 0.1147 | likely_benign | 0.1182 | benign | -0.282 | Destabilizing | 0.005 | N | 0.153 | neutral | N | 0.35418105 | None | None | N |
D/F | 0.4745 | ambiguous | 0.5406 | ambiguous | 0.088 | Stabilizing | 0.991 | D | 0.399 | neutral | None | None | None | None | N |
D/G | 0.1823 | likely_benign | 0.2256 | benign | -0.639 | Destabilizing | 0.669 | D | 0.343 | neutral | N | 0.503563356 | None | None | N |
D/H | 0.2168 | likely_benign | 0.2507 | benign | 0.257 | Stabilizing | 0.966 | D | 0.359 | neutral | N | 0.485150954 | None | None | N |
D/I | 0.2501 | likely_benign | 0.2817 | benign | 0.309 | Stabilizing | 0.974 | D | 0.404 | neutral | None | None | None | None | N |
D/K | 0.2998 | likely_benign | 0.3632 | ambiguous | 0.143 | Stabilizing | 0.728 | D | 0.343 | neutral | None | None | None | None | N |
D/L | 0.2822 | likely_benign | 0.3298 | benign | 0.309 | Stabilizing | 0.842 | D | 0.409 | neutral | None | None | None | None | N |
D/M | 0.4488 | ambiguous | 0.4934 | ambiguous | 0.363 | Stabilizing | 0.993 | D | 0.381 | neutral | None | None | None | None | N |
D/N | 0.0932 | likely_benign | 0.0964 | benign | -0.415 | Destabilizing | 0.005 | N | 0.153 | neutral | N | 0.450787664 | None | None | N |
D/P | 0.5883 | likely_pathogenic | 0.7001 | pathogenic | 0.106 | Stabilizing | 0.974 | D | 0.367 | neutral | None | None | None | None | N |
D/Q | 0.2486 | likely_benign | 0.2861 | benign | -0.312 | Destabilizing | 0.067 | N | 0.185 | neutral | None | None | None | None | N |
D/R | 0.3282 | likely_benign | 0.3985 | ambiguous | 0.452 | Stabilizing | 0.728 | D | 0.377 | neutral | None | None | None | None | N |
D/S | 0.1218 | likely_benign | 0.1308 | benign | -0.542 | Destabilizing | 0.525 | D | 0.307 | neutral | None | None | None | None | N |
D/T | 0.1864 | likely_benign | 0.2007 | benign | -0.317 | Destabilizing | 0.842 | D | 0.335 | neutral | None | None | None | None | N |
D/V | 0.135 | likely_benign | 0.1507 | benign | 0.106 | Stabilizing | 0.966 | D | 0.395 | neutral | N | 0.405340589 | None | None | N |
D/W | 0.7891 | likely_pathogenic | 0.8526 | pathogenic | 0.329 | Stabilizing | 0.998 | D | 0.539 | neutral | None | None | None | None | N |
D/Y | 0.1707 | likely_benign | 0.2094 | benign | 0.352 | Stabilizing | 0.989 | D | 0.397 | neutral | N | 0.474549958 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.