Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9046 | 27361;27362;27363 | chr2:178712889;178712888;178712887 | chr2:179577616;179577615;179577614 |
N2AB | 8729 | 26410;26411;26412 | chr2:178712889;178712888;178712887 | chr2:179577616;179577615;179577614 |
N2A | 7802 | 23629;23630;23631 | chr2:178712889;178712888;178712887 | chr2:179577616;179577615;179577614 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs772800519 | -0.592 | 0.136 | N | 0.16 | 0.4 | 0.317084106153 | gnomAD-2.1.1 | 2.82E-05 | None | None | None | None | I | None | 0 | 2.03678E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/S | rs772800519 | -0.592 | 0.136 | N | 0.16 | 0.4 | 0.317084106153 | gnomAD-4.0.0 | 6.84321E-06 | None | None | None | None | I | None | 0 | 2.01468E-04 | None | 3.82878E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0807 | likely_benign | 0.0901 | benign | -0.48 | Destabilizing | 0.022 | N | 0.167 | neutral | N | 0.510105639 | None | None | I |
P/C | 0.5899 | likely_pathogenic | 0.6848 | pathogenic | -0.744 | Destabilizing | 0.998 | D | 0.545 | neutral | None | None | None | None | I |
P/D | 0.5873 | likely_pathogenic | 0.6511 | pathogenic | -0.395 | Destabilizing | 0.016 | N | 0.16 | neutral | None | None | None | None | I |
P/E | 0.3258 | likely_benign | 0.36 | ambiguous | -0.485 | Destabilizing | 0.728 | D | 0.381 | neutral | None | None | None | None | I |
P/F | 0.4304 | ambiguous | 0.5061 | ambiguous | -0.667 | Destabilizing | 0.949 | D | 0.578 | neutral | None | None | None | None | I |
P/G | 0.3976 | ambiguous | 0.4748 | ambiguous | -0.598 | Destabilizing | 0.688 | D | 0.396 | neutral | None | None | None | None | I |
P/H | 0.2126 | likely_benign | 0.258 | benign | -0.053 | Destabilizing | 0.997 | D | 0.509 | neutral | D | 0.607367303 | None | None | I |
P/I | 0.3332 | likely_benign | 0.3884 | ambiguous | -0.302 | Destabilizing | 0.728 | D | 0.561 | neutral | None | None | None | None | I |
P/K | 0.2887 | likely_benign | 0.3496 | ambiguous | -0.492 | Destabilizing | 0.842 | D | 0.439 | neutral | None | None | None | None | I |
P/L | 0.1162 | likely_benign | 0.135 | benign | -0.302 | Destabilizing | 0.012 | N | 0.211 | neutral | D | 0.578346722 | None | None | I |
P/M | 0.3036 | likely_benign | 0.3512 | ambiguous | -0.587 | Destabilizing | 0.949 | D | 0.52 | neutral | None | None | None | None | I |
P/N | 0.4597 | ambiguous | 0.5297 | ambiguous | -0.326 | Destabilizing | 0.842 | D | 0.528 | neutral | None | None | None | None | I |
P/Q | 0.1686 | likely_benign | 0.1993 | benign | -0.519 | Destabilizing | 0.974 | D | 0.521 | neutral | None | None | None | None | I |
P/R | 0.1799 | likely_benign | 0.2232 | benign | -0.006 | Destabilizing | 0.966 | D | 0.547 | neutral | D | 0.613696469 | None | None | I |
P/S | 0.1263 | likely_benign | 0.1458 | benign | -0.654 | Destabilizing | 0.136 | N | 0.16 | neutral | N | 0.521942471 | None | None | I |
P/T | 0.1337 | likely_benign | 0.1546 | benign | -0.645 | Destabilizing | 0.669 | D | 0.377 | neutral | D | 0.567263539 | None | None | I |
P/V | 0.222 | likely_benign | 0.2624 | benign | -0.33 | Destabilizing | 0.728 | D | 0.443 | neutral | None | None | None | None | I |
P/W | 0.6372 | likely_pathogenic | 0.7138 | pathogenic | -0.748 | Destabilizing | 0.998 | D | 0.597 | neutral | None | None | None | None | I |
P/Y | 0.4144 | ambiguous | 0.4753 | ambiguous | -0.465 | Destabilizing | 0.974 | D | 0.569 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.