Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9049 | 27370;27371;27372 | chr2:178712880;178712879;178712878 | chr2:179577607;179577606;179577605 |
N2AB | 8732 | 26419;26420;26421 | chr2:178712880;178712879;178712878 | chr2:179577607;179577606;179577605 |
N2A | 7805 | 23638;23639;23640 | chr2:178712880;178712879;178712878 | chr2:179577607;179577606;179577605 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.007 | N | 0.231 | 0.222 | 0.301122078929 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0748 | likely_benign | 0.0782 | benign | -0.404 | Destabilizing | 0.004 | N | 0.199 | neutral | None | None | None | None | I |
S/C | 0.1302 | likely_benign | 0.144 | benign | -0.411 | Destabilizing | 0.196 | N | 0.417 | neutral | N | 0.517349525 | None | None | I |
S/D | 0.1923 | likely_benign | 0.2071 | benign | 0.586 | Stabilizing | None | N | 0.096 | neutral | None | None | None | None | I |
S/E | 0.2574 | likely_benign | 0.2702 | benign | 0.533 | Stabilizing | None | N | 0.097 | neutral | None | None | None | None | I |
S/F | 0.1473 | likely_benign | 0.1468 | benign | -0.934 | Destabilizing | None | N | 0.323 | neutral | None | None | None | None | I |
S/G | 0.0941 | likely_benign | 0.1029 | benign | -0.551 | Destabilizing | 0.007 | N | 0.231 | neutral | N | 0.498231312 | None | None | I |
S/H | 0.1377 | likely_benign | 0.1478 | benign | -0.973 | Destabilizing | 0.245 | N | 0.425 | neutral | None | None | None | None | I |
S/I | 0.1009 | likely_benign | 0.1062 | benign | -0.143 | Destabilizing | None | N | 0.339 | neutral | D | 0.537948076 | None | None | I |
S/K | 0.2237 | likely_benign | 0.239 | benign | -0.272 | Destabilizing | None | N | 0.084 | neutral | None | None | None | None | I |
S/L | 0.0848 | likely_benign | 0.0846 | benign | -0.143 | Destabilizing | 0.009 | N | 0.308 | neutral | None | None | None | None | I |
S/M | 0.1517 | likely_benign | 0.1468 | benign | -0.121 | Destabilizing | 0.245 | N | 0.427 | neutral | None | None | None | None | I |
S/N | 0.0832 | likely_benign | 0.0884 | benign | -0.176 | Destabilizing | None | N | 0.064 | neutral | N | 0.479785207 | None | None | I |
S/P | 0.5559 | ambiguous | 0.616 | pathogenic | -0.199 | Destabilizing | 0.085 | N | 0.449 | neutral | None | None | None | None | I |
S/Q | 0.2193 | likely_benign | 0.2336 | benign | -0.299 | Destabilizing | 0.022 | N | 0.277 | neutral | None | None | None | None | I |
S/R | 0.1764 | likely_benign | 0.1888 | benign | -0.196 | Destabilizing | 0.017 | N | 0.406 | neutral | N | 0.519746317 | None | None | I |
S/T | 0.059 | likely_benign | 0.0622 | benign | -0.274 | Destabilizing | None | N | 0.118 | neutral | N | 0.446960712 | None | None | I |
S/V | 0.1162 | likely_benign | 0.1207 | benign | -0.199 | Destabilizing | 0.009 | N | 0.321 | neutral | None | None | None | None | I |
S/W | 0.2506 | likely_benign | 0.2571 | benign | -0.946 | Destabilizing | 0.788 | D | 0.487 | neutral | None | None | None | None | I |
S/Y | 0.1221 | likely_benign | 0.1264 | benign | -0.631 | Destabilizing | 0.022 | N | 0.572 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.