Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9056 | 27391;27392;27393 | chr2:178712859;178712858;178712857 | chr2:179577586;179577585;179577584 |
N2AB | 8739 | 26440;26441;26442 | chr2:178712859;178712858;178712857 | chr2:179577586;179577585;179577584 |
N2A | 7812 | 23659;23660;23661 | chr2:178712859;178712858;178712857 | chr2:179577586;179577585;179577584 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.002 | N | 0.148 | 0.083 | 0.0716867268079 | gnomAD-4.0.0 | 6.84251E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52042E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0831 | likely_benign | 0.0849 | benign | -0.264 | Destabilizing | 0.004 | N | 0.125 | neutral | None | None | None | None | N |
S/C | 0.1876 | likely_benign | 0.1908 | benign | -0.534 | Destabilizing | 0.978 | D | 0.326 | neutral | N | 0.452996316 | None | None | N |
S/D | 0.2351 | likely_benign | 0.305 | benign | 0.07 | Stabilizing | 0.129 | N | 0.235 | neutral | None | None | None | None | N |
S/E | 0.3448 | ambiguous | 0.4341 | ambiguous | -0.03 | Destabilizing | 0.01 | N | 0.145 | neutral | None | None | None | None | N |
S/F | 0.1633 | likely_benign | 0.1744 | benign | -1.054 | Destabilizing | 0.94 | D | 0.349 | neutral | None | None | None | None | N |
S/G | 0.0916 | likely_benign | 0.0974 | benign | -0.277 | Destabilizing | None | N | 0.115 | neutral | N | 0.380123487 | None | None | N |
S/H | 0.2825 | likely_benign | 0.3342 | benign | -0.501 | Destabilizing | 0.716 | D | 0.321 | neutral | None | None | None | None | N |
S/I | 0.1551 | likely_benign | 0.1656 | benign | -0.354 | Destabilizing | 0.794 | D | 0.386 | neutral | N | 0.476127 | None | None | N |
S/K | 0.4582 | ambiguous | 0.57 | pathogenic | -0.37 | Destabilizing | 0.129 | N | 0.232 | neutral | None | None | None | None | N |
S/L | 0.1027 | likely_benign | 0.1056 | benign | -0.354 | Destabilizing | 0.418 | N | 0.349 | neutral | None | None | None | None | N |
S/M | 0.205 | likely_benign | 0.2161 | benign | -0.395 | Destabilizing | 0.94 | D | 0.324 | neutral | None | None | None | None | N |
S/N | 0.1045 | likely_benign | 0.1213 | benign | -0.231 | Destabilizing | 0.002 | N | 0.148 | neutral | N | 0.411089473 | None | None | N |
S/P | 0.1227 | likely_benign | 0.1397 | benign | -0.303 | Destabilizing | 0.593 | D | 0.411 | neutral | None | None | None | None | N |
S/Q | 0.3636 | ambiguous | 0.4373 | ambiguous | -0.392 | Destabilizing | 0.027 | N | 0.183 | neutral | None | None | None | None | N |
S/R | 0.383 | ambiguous | 0.4773 | ambiguous | -0.148 | Destabilizing | 0.351 | N | 0.391 | neutral | N | 0.451728868 | None | None | N |
S/T | 0.0909 | likely_benign | 0.0947 | benign | -0.347 | Destabilizing | 0.183 | N | 0.265 | neutral | N | 0.488704894 | None | None | N |
S/V | 0.1751 | likely_benign | 0.1815 | benign | -0.303 | Destabilizing | 0.418 | N | 0.355 | neutral | None | None | None | None | N |
S/W | 0.2784 | likely_benign | 0.32 | benign | -1.154 | Destabilizing | 0.983 | D | 0.379 | neutral | None | None | None | None | N |
S/Y | 0.1585 | likely_benign | 0.1754 | benign | -0.835 | Destabilizing | 0.94 | D | 0.351 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.