Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9061 | 27406;27407;27408 | chr2:178712844;178712843;178712842 | chr2:179577571;179577570;179577569 |
N2AB | 8744 | 26455;26456;26457 | chr2:178712844;178712843;178712842 | chr2:179577571;179577570;179577569 |
N2A | 7817 | 23674;23675;23676 | chr2:178712844;178712843;178712842 | chr2:179577571;179577570;179577569 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs772373852 | 0.079 | 0.016 | N | 0.207 | 0.117 | 0.208000267992 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
P/A | rs772373852 | 0.079 | 0.016 | N | 0.207 | 0.117 | 0.208000267992 | gnomAD-4.0.0 | 2.73692E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.63811E-05 | 0 |
P/Q | None | None | 0.016 | N | 0.224 | 0.143 | 0.363751660372 | gnomAD-4.0.0 | 2.05269E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.47826E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0675 | likely_benign | 0.0696 | benign | -0.391 | Destabilizing | 0.016 | N | 0.207 | neutral | N | 0.517319301 | None | None | N |
P/C | 0.5066 | ambiguous | 0.4889 | ambiguous | -0.627 | Destabilizing | 0.977 | D | 0.479 | neutral | None | None | None | None | N |
P/D | 0.3806 | ambiguous | 0.3921 | ambiguous | -0.373 | Destabilizing | 0.617 | D | 0.378 | neutral | None | None | None | None | N |
P/E | 0.2035 | likely_benign | 0.2131 | benign | -0.5 | Destabilizing | 0.447 | N | 0.348 | neutral | None | None | None | None | N |
P/F | 0.3875 | ambiguous | 0.3766 | ambiguous | -0.739 | Destabilizing | 0.92 | D | 0.475 | neutral | None | None | None | None | N |
P/G | 0.2598 | likely_benign | 0.269 | benign | -0.487 | Destabilizing | 0.447 | N | 0.379 | neutral | None | None | None | None | N |
P/H | 0.1574 | likely_benign | 0.1581 | benign | -0.116 | Destabilizing | 0.977 | D | 0.445 | neutral | None | None | None | None | N |
P/I | 0.2785 | likely_benign | 0.2717 | benign | -0.292 | Destabilizing | 0.85 | D | 0.479 | neutral | None | None | None | None | N |
P/K | 0.1893 | likely_benign | 0.1976 | benign | -0.397 | Destabilizing | 0.447 | N | 0.333 | neutral | None | None | None | None | N |
P/L | 0.1034 | likely_benign | 0.1041 | benign | -0.292 | Destabilizing | 0.549 | D | 0.407 | neutral | N | 0.491058206 | None | None | N |
P/M | 0.2657 | likely_benign | 0.2609 | benign | -0.392 | Destabilizing | 0.992 | D | 0.445 | neutral | None | None | None | None | N |
P/N | 0.3075 | likely_benign | 0.3049 | benign | -0.13 | Destabilizing | 0.739 | D | 0.418 | neutral | None | None | None | None | N |
P/Q | 0.1166 | likely_benign | 0.1206 | benign | -0.385 | Destabilizing | 0.016 | N | 0.224 | neutral | N | 0.479166344 | None | None | N |
P/R | 0.1217 | likely_benign | 0.1253 | benign | 0.111 | Stabilizing | 0.681 | D | 0.429 | neutral | D | 0.527170935 | None | None | N |
P/S | 0.1025 | likely_benign | 0.1015 | benign | -0.438 | Destabilizing | 0.004 | N | 0.221 | neutral | N | 0.442434753 | None | None | N |
P/T | 0.0893 | likely_benign | 0.0935 | benign | -0.468 | Destabilizing | 0.379 | N | 0.331 | neutral | N | 0.470893578 | None | None | N |
P/V | 0.1961 | likely_benign | 0.1952 | benign | -0.292 | Destabilizing | 0.617 | D | 0.388 | neutral | None | None | None | None | N |
P/W | 0.4647 | ambiguous | 0.4706 | ambiguous | -0.812 | Destabilizing | 0.992 | D | 0.576 | neutral | None | None | None | None | N |
P/Y | 0.3528 | ambiguous | 0.355 | ambiguous | -0.511 | Destabilizing | 0.972 | D | 0.475 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.