Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9075 | 27448;27449;27450 | chr2:178712802;178712801;178712800 | chr2:179577529;179577528;179577527 |
N2AB | 8758 | 26497;26498;26499 | chr2:178712802;178712801;178712800 | chr2:179577529;179577528;179577527 |
N2A | 7831 | 23716;23717;23718 | chr2:178712802;178712801;178712800 | chr2:179577529;179577528;179577527 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1560584120 | None | 0.801 | N | 0.554 | 0.238 | 0.348983352498 | gnomAD-4.0.0 | 1.36846E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79895E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2063 | likely_benign | 0.2034 | benign | -0.939 | Destabilizing | 0.454 | N | 0.433 | neutral | N | 0.501581844 | None | None | N |
E/C | 0.8737 | likely_pathogenic | 0.8808 | pathogenic | -0.527 | Destabilizing | 0.998 | D | 0.645 | neutral | None | None | None | None | N |
E/D | 0.4387 | ambiguous | 0.4462 | ambiguous | -1.377 | Destabilizing | 0.891 | D | 0.533 | neutral | N | 0.506950378 | None | None | N |
E/F | 0.7256 | likely_pathogenic | 0.7644 | pathogenic | -0.792 | Destabilizing | 0.949 | D | 0.634 | neutral | None | None | None | None | N |
E/G | 0.3092 | likely_benign | 0.3169 | benign | -1.312 | Destabilizing | 0.891 | D | 0.589 | neutral | N | 0.511702837 | None | None | N |
E/H | 0.4905 | ambiguous | 0.5189 | ambiguous | -1.093 | Destabilizing | 0.991 | D | 0.557 | neutral | None | None | None | None | N |
E/I | 0.3282 | likely_benign | 0.3361 | benign | 0.084 | Stabilizing | 0.728 | D | 0.583 | neutral | None | None | None | None | N |
E/K | 0.1367 | likely_benign | 0.1426 | benign | -0.683 | Destabilizing | 0.801 | D | 0.554 | neutral | N | 0.48688175 | None | None | N |
E/L | 0.4291 | ambiguous | 0.4308 | ambiguous | 0.084 | Stabilizing | 0.525 | D | 0.498 | neutral | None | None | None | None | N |
E/M | 0.423 | ambiguous | 0.4272 | ambiguous | 0.667 | Stabilizing | 0.325 | N | 0.493 | neutral | None | None | None | None | N |
E/N | 0.4856 | ambiguous | 0.4847 | ambiguous | -1.082 | Destabilizing | 0.915 | D | 0.518 | neutral | None | None | None | None | N |
E/P | 0.9783 | likely_pathogenic | 0.9851 | pathogenic | -0.236 | Destabilizing | 0.991 | D | 0.565 | neutral | None | None | None | None | N |
E/Q | 0.1197 | likely_benign | 0.1211 | benign | -0.933 | Destabilizing | 0.891 | D | 0.527 | neutral | N | 0.516127222 | None | None | N |
E/R | 0.2276 | likely_benign | 0.2489 | benign | -0.601 | Destabilizing | 0.915 | D | 0.541 | neutral | None | None | None | None | N |
E/S | 0.2715 | likely_benign | 0.2668 | benign | -1.51 | Destabilizing | 0.525 | D | 0.511 | neutral | None | None | None | None | N |
E/T | 0.2412 | likely_benign | 0.2406 | benign | -1.178 | Destabilizing | 0.029 | N | 0.311 | neutral | None | None | None | None | N |
E/V | 0.1828 | likely_benign | 0.1815 | benign | -0.236 | Destabilizing | 0.005 | N | 0.479 | neutral | N | 0.441496177 | None | None | N |
E/W | 0.903 | likely_pathogenic | 0.9257 | pathogenic | -0.705 | Destabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | N |
E/Y | 0.6616 | likely_pathogenic | 0.7038 | pathogenic | -0.542 | Destabilizing | 0.991 | D | 0.614 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.