Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9078 | 27457;27458;27459 | chr2:178712793;178712792;178712791 | chr2:179577520;179577519;179577518 |
N2AB | 8761 | 26506;26507;26508 | chr2:178712793;178712792;178712791 | chr2:179577520;179577519;179577518 |
N2A | 7834 | 23725;23726;23727 | chr2:178712793;178712792;178712791 | chr2:179577520;179577519;179577518 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.993 | N | 0.799 | 0.43 | 0.476832112026 | gnomAD-4.0.0 | 6.84223E-07 | None | None | None | None | N | None | 0 | 2.23684E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.821 | likely_pathogenic | 0.8756 | pathogenic | -2.743 | Highly Destabilizing | 0.983 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/C | 0.7582 | likely_pathogenic | 0.8141 | pathogenic | -2.074 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
L/D | 0.9845 | likely_pathogenic | 0.9924 | pathogenic | -3.286 | Highly Destabilizing | 0.999 | D | 0.873 | deleterious | None | None | None | None | N |
L/E | 0.9392 | likely_pathogenic | 0.964 | pathogenic | -2.967 | Highly Destabilizing | 0.998 | D | 0.853 | deleterious | None | None | None | None | N |
L/F | 0.2329 | likely_benign | 0.2803 | benign | -1.632 | Destabilizing | 0.993 | D | 0.799 | deleterious | N | 0.504218793 | None | None | N |
L/G | 0.9518 | likely_pathogenic | 0.9729 | pathogenic | -3.379 | Highly Destabilizing | 0.998 | D | 0.849 | deleterious | None | None | None | None | N |
L/H | 0.8023 | likely_pathogenic | 0.874 | pathogenic | -2.987 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
L/I | 0.0898 | likely_benign | 0.1001 | benign | -0.847 | Destabilizing | 0.966 | D | 0.581 | neutral | None | None | None | None | N |
L/K | 0.9007 | likely_pathogenic | 0.9435 | pathogenic | -2.134 | Highly Destabilizing | 0.998 | D | 0.851 | deleterious | None | None | None | None | N |
L/M | 0.1699 | likely_benign | 0.1783 | benign | -0.97 | Destabilizing | 0.898 | D | 0.541 | neutral | N | 0.501243052 | None | None | N |
L/N | 0.9285 | likely_pathogenic | 0.9623 | pathogenic | -2.778 | Highly Destabilizing | 0.999 | D | 0.873 | deleterious | None | None | None | None | N |
L/P | 0.9833 | likely_pathogenic | 0.9927 | pathogenic | -1.466 | Destabilizing | 0.999 | D | 0.87 | deleterious | None | None | None | None | N |
L/Q | 0.7971 | likely_pathogenic | 0.8606 | pathogenic | -2.454 | Highly Destabilizing | 0.998 | D | 0.865 | deleterious | None | None | None | None | N |
L/R | 0.8138 | likely_pathogenic | 0.8834 | pathogenic | -2.113 | Highly Destabilizing | 0.998 | D | 0.849 | deleterious | None | None | None | None | N |
L/S | 0.9222 | likely_pathogenic | 0.9576 | pathogenic | -3.452 | Highly Destabilizing | 0.997 | D | 0.852 | deleterious | D | 0.557823996 | None | None | N |
L/T | 0.8377 | likely_pathogenic | 0.8976 | pathogenic | -2.958 | Highly Destabilizing | 0.995 | D | 0.809 | deleterious | None | None | None | None | N |
L/V | 0.136 | likely_benign | 0.1542 | benign | -1.466 | Destabilizing | 0.955 | D | 0.6 | neutral | N | 0.495581058 | None | None | N |
L/W | 0.593 | likely_pathogenic | 0.7011 | pathogenic | -2.054 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.54672118 | None | None | N |
L/Y | 0.6011 | likely_pathogenic | 0.7126 | pathogenic | -1.786 | Destabilizing | 0.998 | D | 0.826 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.