Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9079 | 27460;27461;27462 | chr2:178712790;178712789;178712788 | chr2:179577517;179577516;179577515 |
N2AB | 8762 | 26509;26510;26511 | chr2:178712790;178712789;178712788 | chr2:179577517;179577516;179577515 |
N2A | 7835 | 23728;23729;23730 | chr2:178712790;178712789;178712788 | chr2:179577517;179577516;179577515 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/I | None | None | 0.473 | N | 0.289 | 0.122 | 0.325263233342 | gnomAD-4.0.0 | 1.36844E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.7343E-04 | 8.9947E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.4242 | ambiguous | 0.3511 | ambiguous | -2.068 | Highly Destabilizing | 0.329 | N | 0.405 | neutral | None | None | None | None | N |
F/C | 0.4122 | ambiguous | 0.3475 | ambiguous | -0.542 | Destabilizing | 0.993 | D | 0.437 | neutral | N | 0.496479657 | None | None | N |
F/D | 0.6336 | likely_pathogenic | 0.574 | pathogenic | -0.883 | Destabilizing | 0.007 | N | 0.249 | neutral | None | None | None | None | N |
F/E | 0.6812 | likely_pathogenic | 0.6129 | pathogenic | -0.867 | Destabilizing | 0.543 | D | 0.491 | neutral | None | None | None | None | N |
F/G | 0.6667 | likely_pathogenic | 0.5907 | pathogenic | -2.357 | Highly Destabilizing | 0.495 | N | 0.455 | neutral | None | None | None | None | N |
F/H | 0.4044 | ambiguous | 0.3422 | ambiguous | -0.851 | Destabilizing | 0.893 | D | 0.429 | neutral | None | None | None | None | N |
F/I | 0.2696 | likely_benign | 0.2172 | benign | -1.225 | Destabilizing | 0.473 | N | 0.289 | neutral | N | 0.47987842 | None | None | N |
F/K | 0.6673 | likely_pathogenic | 0.5755 | pathogenic | -0.685 | Destabilizing | 0.704 | D | 0.511 | neutral | None | None | None | None | N |
F/L | 0.7407 | likely_pathogenic | 0.6556 | pathogenic | -1.225 | Destabilizing | 0.27 | N | 0.243 | neutral | N | 0.443994978 | None | None | N |
F/M | 0.5223 | ambiguous | 0.4295 | ambiguous | -0.688 | Destabilizing | 0.944 | D | 0.378 | neutral | None | None | None | None | N |
F/N | 0.506 | ambiguous | 0.4148 | ambiguous | -0.471 | Destabilizing | 0.031 | N | 0.263 | neutral | None | None | None | None | N |
F/P | 0.8789 | likely_pathogenic | 0.8607 | pathogenic | -1.497 | Destabilizing | 0.944 | D | 0.51 | neutral | None | None | None | None | N |
F/Q | 0.5879 | likely_pathogenic | 0.5027 | ambiguous | -0.692 | Destabilizing | 0.944 | D | 0.521 | neutral | None | None | None | None | N |
F/R | 0.471 | ambiguous | 0.4064 | ambiguous | 0.029 | Stabilizing | 0.944 | D | 0.524 | neutral | None | None | None | None | N |
F/S | 0.2652 | likely_benign | 0.2235 | benign | -1.203 | Destabilizing | 0.065 | N | 0.211 | neutral | N | 0.443877548 | None | None | N |
F/T | 0.3864 | ambiguous | 0.2998 | benign | -1.099 | Destabilizing | 0.329 | N | 0.463 | neutral | None | None | None | None | N |
F/V | 0.2803 | likely_benign | 0.2196 | benign | -1.497 | Destabilizing | 0.023 | N | 0.127 | neutral | N | 0.469200067 | None | None | N |
F/W | 0.3449 | ambiguous | 0.3208 | benign | -0.82 | Destabilizing | 0.985 | D | 0.395 | neutral | None | None | None | None | N |
F/Y | 0.114 | likely_benign | 0.1075 | benign | -0.876 | Destabilizing | 0.006 | N | 0.121 | neutral | N | 0.418925962 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.