Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9086 | 27481;27482;27483 | chr2:178712769;178712768;178712767 | chr2:179577496;179577495;179577494 |
N2AB | 8769 | 26530;26531;26532 | chr2:178712769;178712768;178712767 | chr2:179577496;179577495;179577494 |
N2A | 7842 | 23749;23750;23751 | chr2:178712769;178712768;178712767 | chr2:179577496;179577495;179577494 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.99 | D | 0.507 | 0.495 | 0.453867917445 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
S/R | None | None | 0.81 | N | 0.537 | 0.338 | 0.286465849087 | gnomAD-4.0.0 | 6.84219E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99476E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0914 | likely_benign | 0.0875 | benign | -0.822 | Destabilizing | 0.009 | N | 0.138 | neutral | None | None | None | None | N |
S/C | 0.2065 | likely_benign | 0.1997 | benign | -0.433 | Destabilizing | 0.99 | D | 0.507 | neutral | D | 0.543594081 | None | None | N |
S/D | 0.3913 | ambiguous | 0.4191 | ambiguous | 0.526 | Stabilizing | 0.617 | D | 0.451 | neutral | None | None | None | None | N |
S/E | 0.4854 | ambiguous | 0.5293 | ambiguous | 0.501 | Stabilizing | 0.617 | D | 0.465 | neutral | None | None | None | None | N |
S/F | 0.4437 | ambiguous | 0.4305 | ambiguous | -1.158 | Destabilizing | 0.92 | D | 0.589 | neutral | None | None | None | None | N |
S/G | 0.0741 | likely_benign | 0.0764 | benign | -1.024 | Destabilizing | 0.334 | N | 0.494 | neutral | N | 0.502826441 | None | None | N |
S/H | 0.4417 | ambiguous | 0.4543 | ambiguous | -1.416 | Destabilizing | 0.992 | D | 0.509 | neutral | None | None | None | None | N |
S/I | 0.2751 | likely_benign | 0.2951 | benign | -0.396 | Destabilizing | 0.81 | D | 0.57 | neutral | D | 0.522514085 | None | None | N |
S/K | 0.6047 | likely_pathogenic | 0.658 | pathogenic | -0.382 | Destabilizing | 0.617 | D | 0.459 | neutral | None | None | None | None | N |
S/L | 0.1853 | likely_benign | 0.1804 | benign | -0.396 | Destabilizing | 0.447 | N | 0.524 | neutral | None | None | None | None | N |
S/M | 0.2892 | likely_benign | 0.2713 | benign | -0.125 | Destabilizing | 0.977 | D | 0.511 | neutral | None | None | None | None | N |
S/N | 0.1558 | likely_benign | 0.1597 | benign | -0.241 | Destabilizing | 0.549 | D | 0.472 | neutral | N | 0.515575098 | None | None | N |
S/P | 0.6622 | likely_pathogenic | 0.5947 | pathogenic | -0.507 | Destabilizing | 0.005 | N | 0.299 | neutral | None | None | None | None | N |
S/Q | 0.4728 | ambiguous | 0.5046 | ambiguous | -0.397 | Destabilizing | 0.92 | D | 0.47 | neutral | None | None | None | None | N |
S/R | 0.4996 | ambiguous | 0.5516 | ambiguous | -0.311 | Destabilizing | 0.81 | D | 0.537 | neutral | N | 0.501091694 | None | None | N |
S/T | 0.1157 | likely_benign | 0.1073 | benign | -0.412 | Destabilizing | 0.004 | N | 0.327 | neutral | N | 0.487417984 | None | None | N |
S/V | 0.3347 | likely_benign | 0.3292 | benign | -0.507 | Destabilizing | 0.447 | N | 0.53 | neutral | None | None | None | None | N |
S/W | 0.4898 | ambiguous | 0.511 | ambiguous | -1.064 | Destabilizing | 0.992 | D | 0.645 | neutral | None | None | None | None | N |
S/Y | 0.3276 | likely_benign | 0.3357 | benign | -0.811 | Destabilizing | 0.972 | D | 0.591 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.