Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9090 | 27493;27494;27495 | chr2:178712757;178712756;178712755 | chr2:179577484;179577483;179577482 |
N2AB | 8773 | 26542;26543;26544 | chr2:178712757;178712756;178712755 | chr2:179577484;179577483;179577482 |
N2A | 7846 | 23761;23762;23763 | chr2:178712757;178712756;178712755 | chr2:179577484;179577483;179577482 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.811 | N | 0.595 | 0.358 | 0.503248607038 | gnomAD-4.0.0 | 4.77376E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57452E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1157 | likely_benign | 0.1292 | benign | -1.174 | Destabilizing | 0.64 | D | 0.51 | neutral | N | 0.490449501 | None | None | N |
T/C | 0.5801 | likely_pathogenic | 0.664 | pathogenic | -0.711 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | N |
T/D | 0.6097 | likely_pathogenic | 0.7241 | pathogenic | -1.414 | Destabilizing | 0.919 | D | 0.59 | neutral | None | None | None | None | N |
T/E | 0.4796 | ambiguous | 0.5849 | pathogenic | -1.206 | Destabilizing | 0.919 | D | 0.587 | neutral | None | None | None | None | N |
T/F | 0.3221 | likely_benign | 0.4147 | ambiguous | -0.921 | Destabilizing | 0.988 | D | 0.676 | prob.neutral | None | None | None | None | N |
T/G | 0.3998 | ambiguous | 0.4524 | ambiguous | -1.579 | Destabilizing | 0.851 | D | 0.629 | neutral | None | None | None | None | N |
T/H | 0.3041 | likely_benign | 0.3634 | ambiguous | -1.682 | Destabilizing | 0.999 | D | 0.682 | prob.neutral | None | None | None | None | N |
T/I | 0.2353 | likely_benign | 0.2853 | benign | -0.105 | Destabilizing | 0.811 | D | 0.595 | neutral | N | 0.471344515 | None | None | N |
T/K | 0.2999 | likely_benign | 0.3739 | ambiguous | -0.214 | Destabilizing | 0.919 | D | 0.594 | neutral | None | None | None | None | N |
T/L | 0.1569 | likely_benign | 0.1843 | benign | -0.105 | Destabilizing | 0.702 | D | 0.614 | neutral | None | None | None | None | N |
T/M | 0.1241 | likely_benign | 0.1294 | benign | -0.138 | Destabilizing | 0.988 | D | 0.669 | neutral | None | None | None | None | N |
T/N | 0.2097 | likely_benign | 0.2623 | benign | -0.918 | Destabilizing | 0.896 | D | 0.575 | neutral | N | 0.502984349 | None | None | N |
T/P | 0.75 | likely_pathogenic | 0.8419 | pathogenic | -0.432 | Destabilizing | 0.984 | D | 0.621 | neutral | D | 0.529735884 | None | None | N |
T/Q | 0.3068 | likely_benign | 0.3544 | ambiguous | -0.703 | Destabilizing | 0.988 | D | 0.652 | neutral | None | None | None | None | N |
T/R | 0.2044 | likely_benign | 0.2625 | benign | -0.492 | Destabilizing | 0.976 | D | 0.643 | neutral | None | None | None | None | N |
T/S | 0.1207 | likely_benign | 0.1345 | benign | -1.157 | Destabilizing | 0.046 | N | 0.363 | neutral | N | 0.470756639 | None | None | N |
T/V | 0.1953 | likely_benign | 0.2178 | benign | -0.432 | Destabilizing | 0.132 | N | 0.449 | neutral | None | None | None | None | N |
T/W | 0.6965 | likely_pathogenic | 0.7851 | pathogenic | -1.068 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
T/Y | 0.3576 | ambiguous | 0.4536 | ambiguous | -0.664 | Destabilizing | 0.996 | D | 0.675 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.