Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9092 | 27499;27500;27501 | chr2:178712751;178712750;178712749 | chr2:179577478;179577477;179577476 |
N2AB | 8775 | 26548;26549;26550 | chr2:178712751;178712750;178712749 | chr2:179577478;179577477;179577476 |
N2A | 7848 | 23767;23768;23769 | chr2:178712751;178712750;178712749 | chr2:179577478;179577477;179577476 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/R | None | None | 0.061 | N | 0.529 | 0.292 | 0.663816143375 | gnomAD-4.0.0 | 3.42104E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49729E-06 | 0 | 0 |
I/V | rs1222539429 ![]() |
-0.876 | None | N | 0.174 | 0.103 | 0.517983797298 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
I/V | rs1222539429 ![]() |
-0.876 | None | N | 0.174 | 0.103 | 0.517983797298 | gnomAD-4.0.0 | 8.21051E-06 | None | None | None | None | N | None | 0 | 2.23644E-05 | None | 0 | 5.03905E-05 | None | 0 | 0 | 8.09514E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1657 | likely_benign | 0.1832 | benign | -2.013 | Highly Destabilizing | 0.036 | N | 0.343 | neutral | None | None | None | None | N |
I/C | 0.5758 | likely_pathogenic | 0.6024 | pathogenic | -1.227 | Destabilizing | 0.749 | D | 0.517 | neutral | None | None | None | None | N |
I/D | 0.4684 | ambiguous | 0.529 | ambiguous | -1.708 | Destabilizing | 0.08 | N | 0.513 | neutral | None | None | None | None | N |
I/E | 0.3083 | likely_benign | 0.3394 | benign | -1.552 | Destabilizing | 0.001 | N | 0.471 | neutral | None | None | None | None | N |
I/F | 0.1159 | likely_benign | 0.1205 | benign | -1.212 | Destabilizing | 0.296 | N | 0.543 | neutral | None | None | None | None | N |
I/G | 0.5061 | ambiguous | 0.563 | ambiguous | -2.47 | Highly Destabilizing | 0.148 | N | 0.511 | neutral | None | None | None | None | N |
I/H | 0.2764 | likely_benign | 0.3065 | benign | -1.86 | Destabilizing | 0.001 | N | 0.463 | neutral | None | None | None | None | N |
I/K | 0.2144 | likely_benign | 0.2397 | benign | -1.172 | Destabilizing | 0.061 | N | 0.507 | neutral | N | 0.418365815 | None | None | N |
I/L | 0.0885 | likely_benign | 0.0951 | benign | -0.739 | Destabilizing | 0.028 | N | 0.354 | neutral | N | 0.410287836 | None | None | N |
I/M | 0.0761 | likely_benign | 0.0793 | benign | -0.717 | Destabilizing | 0.526 | D | 0.542 | neutral | N | 0.469701499 | None | None | N |
I/N | 0.1845 | likely_benign | 0.2241 | benign | -1.287 | Destabilizing | 0.148 | N | 0.533 | neutral | None | None | None | None | N |
I/P | 0.926 | likely_pathogenic | 0.9403 | pathogenic | -1.14 | Destabilizing | 0.46 | N | 0.595 | neutral | None | None | None | None | N |
I/Q | 0.2288 | likely_benign | 0.26 | benign | -1.255 | Destabilizing | 0.001 | N | 0.467 | neutral | None | None | None | None | N |
I/R | 0.1463 | likely_benign | 0.1654 | benign | -0.894 | Destabilizing | 0.061 | N | 0.529 | neutral | N | 0.439781237 | None | None | N |
I/S | 0.167 | likely_benign | 0.1914 | benign | -2.016 | Highly Destabilizing | 0.148 | N | 0.491 | neutral | None | None | None | None | N |
I/T | 0.0944 | likely_benign | 0.1001 | benign | -1.731 | Destabilizing | 0.116 | N | 0.446 | neutral | N | 0.421387477 | None | None | N |
I/V | 0.0614 | likely_benign | 0.0624 | benign | -1.14 | Destabilizing | None | N | 0.174 | neutral | N | 0.403609793 | None | None | N |
I/W | 0.5792 | likely_pathogenic | 0.6109 | pathogenic | -1.484 | Destabilizing | 0.972 | D | 0.581 | neutral | None | None | None | None | N |
I/Y | 0.3713 | ambiguous | 0.4031 | ambiguous | -1.176 | Destabilizing | 0.296 | N | 0.555 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.