Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9105 | 27538;27539;27540 | chr2:178712712;178712711;178712710 | chr2:179577439;179577438;179577437 |
N2AB | 8788 | 26587;26588;26589 | chr2:178712712;178712711;178712710 | chr2:179577439;179577438;179577437 |
N2A | 7861 | 23806;23807;23808 | chr2:178712712;178712711;178712710 | chr2:179577439;179577438;179577437 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | None | N | 0.16 | 0.112 | 0.154104182512 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
H/Y | rs771109303 | 0.794 | 0.065 | N | 0.457 | 0.091 | 0.278968121808 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/Y | rs771109303 | 0.794 | 0.065 | N | 0.457 | 0.091 | 0.278968121808 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 1.30873E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/Y | rs771109303 | 0.794 | 0.065 | N | 0.457 | 0.091 | 0.278968121808 | gnomAD-4.0.0 | 8.97128E-06 | None | None | None | None | N | None | 0 | 1.18628E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1999 | likely_benign | 0.1786 | benign | -0.9 | Destabilizing | 0.004 | N | 0.347 | neutral | None | None | None | None | N |
H/C | 0.2149 | likely_benign | 0.1909 | benign | -0.041 | Destabilizing | 0.245 | N | 0.555 | neutral | None | None | None | None | N |
H/D | 0.1634 | likely_benign | 0.1524 | benign | -0.453 | Destabilizing | None | N | 0.161 | neutral | N | 0.504582077 | None | None | N |
H/E | 0.2038 | likely_benign | 0.1919 | benign | -0.328 | Destabilizing | 0.004 | N | 0.262 | neutral | None | None | None | None | N |
H/F | 0.2876 | likely_benign | 0.2513 | benign | 0.521 | Stabilizing | 0.085 | N | 0.559 | neutral | None | None | None | None | N |
H/G | 0.2651 | likely_benign | 0.2273 | benign | -1.294 | Destabilizing | 0.004 | N | 0.384 | neutral | None | None | None | None | N |
H/I | 0.2538 | likely_benign | 0.2334 | benign | 0.205 | Stabilizing | 0.022 | N | 0.588 | neutral | None | None | None | None | N |
H/K | 0.1679 | likely_benign | 0.1625 | benign | -0.507 | Destabilizing | 0.009 | N | 0.341 | neutral | None | None | None | None | N |
H/L | 0.1101 | likely_benign | 0.1008 | benign | 0.205 | Stabilizing | 0.007 | N | 0.435 | neutral | N | 0.495693235 | None | None | N |
H/M | 0.3714 | ambiguous | 0.3436 | ambiguous | 0.014 | Stabilizing | 0.245 | N | 0.554 | neutral | None | None | None | None | N |
H/N | 0.0833 | likely_benign | 0.0772 | benign | -0.714 | Destabilizing | None | N | 0.167 | neutral | N | 0.451902385 | None | None | N |
H/P | 0.2348 | likely_benign | 0.2094 | benign | -0.144 | Destabilizing | 0.065 | N | 0.602 | neutral | D | 0.52413063 | None | None | N |
H/Q | 0.1178 | likely_benign | 0.1095 | benign | -0.444 | Destabilizing | None | N | 0.146 | neutral | N | 0.463215457 | None | None | N |
H/R | 0.0766 | likely_benign | 0.0728 | benign | -0.971 | Destabilizing | None | N | 0.16 | neutral | N | 0.472989733 | None | None | N |
H/S | 0.1552 | likely_benign | 0.1371 | benign | -0.814 | Destabilizing | None | N | 0.163 | neutral | None | None | None | None | N |
H/T | 0.171 | likely_benign | 0.1541 | benign | -0.574 | Destabilizing | None | N | 0.255 | neutral | None | None | None | None | N |
H/V | 0.1985 | likely_benign | 0.1792 | benign | -0.144 | Destabilizing | None | N | 0.381 | neutral | None | None | None | None | N |
H/W | 0.3314 | likely_benign | 0.313 | benign | 0.939 | Stabilizing | 0.788 | D | 0.549 | neutral | None | None | None | None | N |
H/Y | 0.0978 | likely_benign | 0.0904 | benign | 0.947 | Stabilizing | 0.065 | N | 0.457 | neutral | N | 0.512009481 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.