Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9122 | 27589;27590;27591 | chr2:178712558;178712557;178712556 | chr2:179577285;179577284;179577283 |
N2AB | 8805 | 26638;26639;26640 | chr2:178712558;178712557;178712556 | chr2:179577285;179577284;179577283 |
N2A | 7878 | 23857;23858;23859 | chr2:178712558;178712557;178712556 | chr2:179577285;179577284;179577283 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs2076813561 | None | 0.454 | N | 0.311 | 0.286 | 0.225902525712 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.091 | likely_benign | 0.0859 | benign | -0.189 | Destabilizing | 0.688 | D | 0.416 | neutral | None | None | None | None | I |
S/C | 0.124 | likely_benign | 0.1297 | benign | -0.362 | Destabilizing | 0.997 | D | 0.428 | neutral | N | 0.520891016 | None | None | I |
S/D | 0.4129 | ambiguous | 0.4579 | ambiguous | 0.541 | Stabilizing | 0.728 | D | 0.309 | neutral | None | None | None | None | I |
S/E | 0.5088 | ambiguous | 0.5192 | ambiguous | 0.518 | Stabilizing | 0.728 | D | 0.301 | neutral | None | None | None | None | I |
S/F | 0.2309 | likely_benign | 0.2139 | benign | -0.649 | Destabilizing | 0.991 | D | 0.445 | neutral | None | None | None | None | I |
S/G | 0.1043 | likely_benign | 0.1154 | benign | -0.362 | Destabilizing | 0.454 | N | 0.311 | neutral | N | 0.508520753 | None | None | I |
S/H | 0.2908 | likely_benign | 0.3177 | benign | -0.658 | Destabilizing | 0.974 | D | 0.394 | neutral | None | None | None | None | I |
S/I | 0.1575 | likely_benign | 0.1664 | benign | 0.143 | Stabilizing | 0.934 | D | 0.437 | neutral | D | 0.526978934 | None | None | I |
S/K | 0.563 | ambiguous | 0.5935 | pathogenic | -0.139 | Destabilizing | 0.728 | D | 0.307 | neutral | None | None | None | None | I |
S/L | 0.1204 | likely_benign | 0.1124 | benign | 0.143 | Stabilizing | 0.842 | D | 0.407 | neutral | None | None | None | None | I |
S/M | 0.2259 | likely_benign | 0.2258 | benign | -0.098 | Destabilizing | 0.998 | D | 0.395 | neutral | None | None | None | None | I |
S/N | 0.1231 | likely_benign | 0.1468 | benign | -0.182 | Destabilizing | 0.012 | N | 0.159 | neutral | N | 0.521783758 | None | None | I |
S/P | 0.3582 | ambiguous | 0.3711 | ambiguous | 0.065 | Stabilizing | 0.974 | D | 0.394 | neutral | None | None | None | None | I |
S/Q | 0.4126 | ambiguous | 0.4399 | ambiguous | -0.237 | Destabilizing | 0.142 | N | 0.251 | neutral | None | None | None | None | I |
S/R | 0.4165 | ambiguous | 0.4525 | ambiguous | -0.049 | Destabilizing | 0.876 | D | 0.354 | neutral | N | 0.483895584 | None | None | I |
S/T | 0.0882 | likely_benign | 0.0834 | benign | -0.208 | Destabilizing | 0.051 | N | 0.227 | neutral | N | 0.466255762 | None | None | I |
S/V | 0.175 | likely_benign | 0.1709 | benign | 0.065 | Stabilizing | 0.842 | D | 0.405 | neutral | None | None | None | None | I |
S/W | 0.3765 | ambiguous | 0.3771 | ambiguous | -0.745 | Destabilizing | 0.998 | D | 0.583 | neutral | None | None | None | None | I |
S/Y | 0.1888 | likely_benign | 0.1906 | benign | -0.379 | Destabilizing | 0.991 | D | 0.444 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.