Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9124 | 27595;27596;27597 | chr2:178712552;178712551;178712550 | chr2:179577279;179577278;179577277 |
N2AB | 8807 | 26644;26645;26646 | chr2:178712552;178712551;178712550 | chr2:179577279;179577278;179577277 |
N2A | 7880 | 23863;23864;23865 | chr2:178712552;178712551;178712550 | chr2:179577279;179577278;179577277 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.026 | N | 0.284 | 0.046 | 0.158396225186 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2327 | likely_benign | 0.2255 | benign | -0.478 | Destabilizing | 0.896 | D | 0.569 | neutral | D | 0.525304066 | None | None | I |
E/C | 0.9275 | likely_pathogenic | 0.9127 | pathogenic | -0.274 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | I |
E/D | 0.2965 | likely_benign | 0.2676 | benign | -0.43 | Destabilizing | 0.026 | N | 0.284 | neutral | N | 0.496368025 | None | None | I |
E/F | 0.8464 | likely_pathogenic | 0.8294 | pathogenic | -0.132 | Destabilizing | 0.996 | D | 0.64 | neutral | None | None | None | None | I |
E/G | 0.2366 | likely_benign | 0.2415 | benign | -0.696 | Destabilizing | 0.896 | D | 0.598 | neutral | N | 0.51305343 | None | None | I |
E/H | 0.6534 | likely_pathogenic | 0.6322 | pathogenic | 0.244 | Stabilizing | 0.988 | D | 0.481 | neutral | None | None | None | None | I |
E/I | 0.4383 | ambiguous | 0.4312 | ambiguous | 0.074 | Stabilizing | 0.988 | D | 0.643 | neutral | None | None | None | None | I |
E/K | 0.1955 | likely_benign | 0.1994 | benign | 0.274 | Stabilizing | 0.811 | D | 0.53 | neutral | N | 0.487439111 | None | None | I |
E/L | 0.4647 | ambiguous | 0.4579 | ambiguous | 0.074 | Stabilizing | 0.976 | D | 0.611 | neutral | None | None | None | None | I |
E/M | 0.574 | likely_pathogenic | 0.5605 | ambiguous | 0.067 | Stabilizing | 0.999 | D | 0.64 | neutral | None | None | None | None | I |
E/N | 0.4898 | ambiguous | 0.4603 | ambiguous | -0.283 | Destabilizing | 0.261 | N | 0.313 | neutral | None | None | None | None | I |
E/P | 0.5225 | ambiguous | 0.5055 | ambiguous | -0.09 | Destabilizing | 0.988 | D | 0.543 | neutral | None | None | None | None | I |
E/Q | 0.1497 | likely_benign | 0.1541 | benign | -0.216 | Destabilizing | 0.437 | N | 0.301 | neutral | N | 0.507006306 | None | None | I |
E/R | 0.3229 | likely_benign | 0.3279 | benign | 0.601 | Stabilizing | 0.976 | D | 0.479 | neutral | None | None | None | None | I |
E/S | 0.3593 | ambiguous | 0.3398 | benign | -0.411 | Destabilizing | 0.919 | D | 0.519 | neutral | None | None | None | None | I |
E/T | 0.3608 | ambiguous | 0.3425 | ambiguous | -0.22 | Destabilizing | 0.919 | D | 0.532 | neutral | None | None | None | None | I |
E/V | 0.2714 | likely_benign | 0.2624 | benign | -0.09 | Destabilizing | 0.984 | D | 0.591 | neutral | D | 0.526517574 | None | None | I |
E/W | 0.9426 | likely_pathogenic | 0.9359 | pathogenic | 0.101 | Stabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
E/Y | 0.7771 | likely_pathogenic | 0.7526 | pathogenic | 0.131 | Stabilizing | 0.996 | D | 0.623 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.