Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9139 | 27640;27641;27642 | chr2:178712507;178712506;178712505 | chr2:179577234;179577233;179577232 |
N2AB | 8822 | 26689;26690;26691 | chr2:178712507;178712506;178712505 | chr2:179577234;179577233;179577232 |
N2A | 7895 | 23908;23909;23910 | chr2:178712507;178712506;178712505 | chr2:179577234;179577233;179577232 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs770133378 | 0.035 | 0.018 | D | 0.327 | 0.478 | 0.585352569408 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
P/L | rs770133378 | 0.035 | 0.018 | D | 0.327 | 0.478 | 0.585352569408 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 4.14422E-04 | 0 |
P/L | rs770133378 | 0.035 | 0.018 | D | 0.327 | 0.478 | 0.585352569408 | gnomAD-4.0.0 | 1.36338E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.41546E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1648 | likely_benign | 0.0879 | benign | -0.319 | Destabilizing | 0.349 | N | 0.437 | neutral | N | 0.521791113 | None | None | I |
P/C | 0.6874 | likely_pathogenic | 0.5422 | ambiguous | -0.581 | Destabilizing | 0.996 | D | 0.623 | neutral | None | None | None | None | I |
P/D | 0.6402 | likely_pathogenic | 0.4374 | ambiguous | -0.485 | Destabilizing | 0.923 | D | 0.441 | neutral | None | None | None | None | I |
P/E | 0.3713 | ambiguous | 0.2441 | benign | -0.605 | Destabilizing | 0.923 | D | 0.435 | neutral | None | None | None | None | I |
P/F | 0.5282 | ambiguous | 0.3588 | ambiguous | -0.677 | Destabilizing | 0.858 | D | 0.616 | neutral | None | None | None | None | I |
P/G | 0.5776 | likely_pathogenic | 0.3819 | ambiguous | -0.408 | Destabilizing | 0.011 | N | 0.262 | neutral | None | None | None | None | I |
P/H | 0.3257 | likely_benign | 0.1822 | benign | -0.062 | Destabilizing | 0.986 | D | 0.518 | neutral | D | 0.597152058 | None | None | I |
P/I | 0.2909 | likely_benign | 0.2224 | benign | -0.231 | Destabilizing | 0.858 | D | 0.594 | neutral | None | None | None | None | I |
P/K | 0.4849 | ambiguous | 0.2939 | benign | -0.418 | Destabilizing | 0.858 | D | 0.438 | neutral | None | None | None | None | I |
P/L | 0.111 | likely_benign | 0.0762 | benign | -0.231 | Destabilizing | 0.018 | N | 0.327 | neutral | D | 0.540968213 | None | None | I |
P/M | 0.3138 | likely_benign | 0.2141 | benign | -0.446 | Destabilizing | 0.979 | D | 0.525 | neutral | None | None | None | None | I |
P/N | 0.5373 | ambiguous | 0.3307 | benign | -0.128 | Destabilizing | 0.858 | D | 0.502 | neutral | None | None | None | None | I |
P/Q | 0.2554 | likely_benign | 0.1314 | benign | -0.373 | Destabilizing | 0.923 | D | 0.431 | neutral | None | None | None | None | I |
P/R | 0.3582 | ambiguous | 0.201 | benign | 0.063 | Stabilizing | 0.901 | D | 0.519 | neutral | D | 0.603481225 | None | None | I |
P/S | 0.265 | likely_benign | 0.1212 | benign | -0.392 | Destabilizing | 0.075 | N | 0.254 | neutral | D | 0.534944617 | None | None | I |
P/T | 0.1932 | likely_benign | 0.1117 | benign | -0.423 | Destabilizing | 0.565 | D | 0.453 | neutral | D | 0.583747229 | None | None | I |
P/V | 0.2304 | likely_benign | 0.165 | benign | -0.229 | Destabilizing | 0.633 | D | 0.472 | neutral | None | None | None | None | I |
P/W | 0.7341 | likely_pathogenic | 0.5894 | pathogenic | -0.768 | Destabilizing | 0.996 | D | 0.647 | neutral | None | None | None | None | I |
P/Y | 0.5213 | ambiguous | 0.3563 | ambiguous | -0.47 | Destabilizing | 0.961 | D | 0.616 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.