Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9142 | 27649;27650;27651 | chr2:178712498;178712497;178712496 | chr2:179577225;179577224;179577223 |
N2AB | 8825 | 26698;26699;26700 | chr2:178712498;178712497;178712496 | chr2:179577225;179577224;179577223 |
N2A | 7898 | 23917;23918;23919 | chr2:178712498;178712497;178712496 | chr2:179577225;179577224;179577223 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs781609380 | 0.083 | 0.009 | D | 0.309 | 0.212 | 0.21737058555 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
S/L | rs781609380 | 0.083 | 0.009 | D | 0.309 | 0.212 | 0.21737058555 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 4.78011E-04 |
S/L | rs781609380 | 0.083 | 0.009 | D | 0.309 | 0.212 | 0.21737058555 | gnomAD-4.0.0 | 1.17748E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.18666E-05 | 4.39184E-05 | 1.60113E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0635 | likely_benign | 0.0661 | benign | -0.312 | Destabilizing | 0.101 | N | 0.291 | neutral | N | 0.500083121 | None | None | N |
S/C | 0.1459 | likely_benign | 0.126 | benign | -0.427 | Destabilizing | 0.951 | D | 0.469 | neutral | None | None | None | None | N |
S/D | 0.2658 | likely_benign | 0.2747 | benign | 0.054 | Stabilizing | 0.264 | N | 0.325 | neutral | None | None | None | None | N |
S/E | 0.3081 | likely_benign | 0.3478 | ambiguous | 0.006 | Stabilizing | 0.418 | N | 0.323 | neutral | None | None | None | None | N |
S/F | 0.1114 | likely_benign | 0.108 | benign | -0.723 | Destabilizing | 0.002 | N | 0.343 | neutral | None | None | None | None | N |
S/G | 0.1435 | likely_benign | 0.1276 | benign | -0.492 | Destabilizing | 0.228 | N | 0.333 | neutral | None | None | None | None | N |
S/H | 0.2044 | likely_benign | 0.2129 | benign | -0.979 | Destabilizing | 0.836 | D | 0.496 | neutral | None | None | None | None | N |
S/I | 0.1072 | likely_benign | 0.1056 | benign | 0.037 | Stabilizing | 0.264 | N | 0.493 | neutral | None | None | None | None | N |
S/K | 0.3647 | ambiguous | 0.4094 | ambiguous | -0.58 | Destabilizing | 0.418 | N | 0.32 | neutral | None | None | None | None | N |
S/L | 0.0676 | likely_benign | 0.0697 | benign | 0.037 | Stabilizing | 0.009 | N | 0.309 | neutral | D | 0.537409358 | None | None | N |
S/M | 0.139 | likely_benign | 0.1295 | benign | 0.049 | Stabilizing | 0.716 | D | 0.499 | neutral | None | None | None | None | N |
S/N | 0.1321 | likely_benign | 0.1158 | benign | -0.454 | Destabilizing | 0.01 | N | 0.183 | neutral | None | None | None | None | N |
S/P | 0.6026 | likely_pathogenic | 0.6009 | pathogenic | -0.047 | Destabilizing | 0.794 | D | 0.523 | neutral | N | 0.513386279 | None | None | N |
S/Q | 0.3014 | likely_benign | 0.3228 | benign | -0.595 | Destabilizing | 0.836 | D | 0.465 | neutral | None | None | None | None | N |
S/R | 0.3149 | likely_benign | 0.3493 | ambiguous | -0.439 | Destabilizing | 0.716 | D | 0.525 | neutral | None | None | None | None | N |
S/T | 0.0668 | likely_benign | 0.0654 | benign | -0.46 | Destabilizing | None | N | 0.107 | neutral | N | 0.466623908 | None | None | N |
S/V | 0.1095 | likely_benign | 0.1092 | benign | -0.047 | Destabilizing | 0.129 | N | 0.455 | neutral | None | None | None | None | N |
S/W | 0.2259 | likely_benign | 0.2415 | benign | -0.77 | Destabilizing | 0.991 | D | 0.588 | neutral | N | 0.513893258 | None | None | N |
S/Y | 0.1203 | likely_benign | 0.1236 | benign | -0.468 | Destabilizing | 0.557 | D | 0.567 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.