Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9154 | 27685;27686;27687 | chr2:178712462;178712461;178712460 | chr2:179577189;179577188;179577187 |
N2AB | 8837 | 26734;26735;26736 | chr2:178712462;178712461;178712460 | chr2:179577189;179577188;179577187 |
N2A | 7910 | 23953;23954;23955 | chr2:178712462;178712461;178712460 | chr2:179577189;179577188;179577187 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.012 | N | 0.308 | 0.159 | 0.56713362702 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
P/S | None | None | 0.012 | N | 0.336 | 0.07 | 0.245101548738 | gnomAD-4.0.0 | 6.84188E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99446E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0558 | likely_benign | 0.0566 | benign | -0.323 | Destabilizing | None | N | 0.147 | neutral | N | 0.456174841 | None | None | N |
P/C | 0.3552 | ambiguous | 0.3256 | benign | -0.575 | Destabilizing | 0.356 | N | 0.368 | neutral | None | None | None | None | N |
P/D | 0.2687 | likely_benign | 0.2637 | benign | -0.262 | Destabilizing | 0.072 | N | 0.297 | neutral | None | None | None | None | N |
P/E | 0.1539 | likely_benign | 0.156 | benign | -0.389 | Destabilizing | 0.016 | N | 0.317 | neutral | None | None | None | None | N |
P/F | 0.2706 | likely_benign | 0.2557 | benign | -0.689 | Destabilizing | 0.356 | N | 0.407 | neutral | None | None | None | None | N |
P/G | 0.1936 | likely_benign | 0.1831 | benign | -0.419 | Destabilizing | 0.016 | N | 0.278 | neutral | None | None | None | None | N |
P/H | 0.1051 | likely_benign | 0.1082 | benign | -0.091 | Destabilizing | None | N | 0.231 | neutral | N | 0.50873989 | None | None | N |
P/I | 0.1749 | likely_benign | 0.1669 | benign | -0.227 | Destabilizing | 0.072 | N | 0.411 | neutral | None | None | None | None | N |
P/K | 0.1572 | likely_benign | 0.1513 | benign | -0.324 | Destabilizing | 0.016 | N | 0.299 | neutral | None | None | None | None | N |
P/L | 0.0839 | likely_benign | 0.0852 | benign | -0.227 | Destabilizing | 0.012 | N | 0.308 | neutral | N | 0.509913326 | None | None | N |
P/M | 0.2087 | likely_benign | 0.196 | benign | -0.322 | Destabilizing | 0.356 | N | 0.36 | neutral | None | None | None | None | N |
P/N | 0.1792 | likely_benign | 0.1673 | benign | -0.044 | Destabilizing | 0.072 | N | 0.363 | neutral | None | None | None | None | N |
P/Q | 0.0832 | likely_benign | 0.0843 | benign | -0.291 | Destabilizing | None | N | 0.166 | neutral | None | None | None | None | N |
P/R | 0.1056 | likely_benign | 0.1094 | benign | 0.152 | Stabilizing | 0.029 | N | 0.363 | neutral | N | 0.52124504 | None | None | N |
P/S | 0.0786 | likely_benign | 0.0759 | benign | -0.361 | Destabilizing | 0.012 | N | 0.336 | neutral | N | 0.454286542 | None | None | N |
P/T | 0.0715 | likely_benign | 0.0708 | benign | -0.391 | Destabilizing | 0.012 | N | 0.289 | neutral | N | 0.490018056 | None | None | N |
P/V | 0.1289 | likely_benign | 0.125 | benign | -0.226 | Destabilizing | 0.016 | N | 0.282 | neutral | None | None | None | None | N |
P/W | 0.3891 | ambiguous | 0.3879 | ambiguous | -0.772 | Destabilizing | 0.864 | D | 0.376 | neutral | None | None | None | None | N |
P/Y | 0.2306 | likely_benign | 0.2248 | benign | -0.461 | Destabilizing | 0.214 | N | 0.453 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.