Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9158 | 27697;27698;27699 | chr2:178712450;178712449;178712448 | chr2:179577177;179577176;179577175 |
N2AB | 8841 | 26746;26747;26748 | chr2:178712450;178712449;178712448 | chr2:179577177;179577176;179577175 |
N2A | 7914 | 23965;23966;23967 | chr2:178712450;178712449;178712448 | chr2:179577177;179577176;179577175 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | None | None | 0.784 | D | 0.583 | 0.281 | 0.745366178539 | gnomAD-4.0.0 | 1.59113E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85798E-06 | 0 | 0 |
C/Y | None | None | 0.01 | N | 0.433 | 0.221 | 0.633466640759 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5782 | likely_pathogenic | 0.5486 | ambiguous | -1.692 | Destabilizing | 0.495 | N | 0.411 | neutral | None | None | None | None | N |
C/D | 0.8945 | likely_pathogenic | 0.8825 | pathogenic | -0.957 | Destabilizing | 0.981 | D | 0.68 | prob.neutral | None | None | None | None | N |
C/E | 0.9043 | likely_pathogenic | 0.8923 | pathogenic | -0.831 | Destabilizing | 0.981 | D | 0.684 | prob.neutral | None | None | None | None | N |
C/F | 0.2208 | likely_benign | 0.2165 | benign | -1.073 | Destabilizing | 0.006 | N | 0.435 | neutral | N | 0.464868895 | None | None | N |
C/G | 0.3139 | likely_benign | 0.3031 | benign | -2.015 | Highly Destabilizing | 0.917 | D | 0.634 | neutral | D | 0.532499397 | None | None | N |
C/H | 0.6116 | likely_pathogenic | 0.5826 | pathogenic | -2.216 | Highly Destabilizing | 0.893 | D | 0.671 | neutral | None | None | None | None | N |
C/I | 0.4526 | ambiguous | 0.4218 | ambiguous | -0.857 | Destabilizing | 0.329 | N | 0.568 | neutral | None | None | None | None | N |
C/K | 0.8894 | likely_pathogenic | 0.8747 | pathogenic | -1.282 | Destabilizing | 0.828 | D | 0.655 | neutral | None | None | None | None | N |
C/L | 0.5017 | ambiguous | 0.477 | ambiguous | -0.857 | Destabilizing | 0.003 | N | 0.348 | neutral | None | None | None | None | N |
C/M | 0.631 | likely_pathogenic | 0.6073 | pathogenic | 0.11 | Stabilizing | 0.893 | D | 0.664 | neutral | None | None | None | None | N |
C/N | 0.6811 | likely_pathogenic | 0.641 | pathogenic | -1.358 | Destabilizing | 0.981 | D | 0.666 | neutral | None | None | None | None | N |
C/P | 0.9881 | likely_pathogenic | 0.9826 | pathogenic | -1.109 | Destabilizing | 0.981 | D | 0.665 | neutral | None | None | None | None | N |
C/Q | 0.7551 | likely_pathogenic | 0.7379 | pathogenic | -1.216 | Destabilizing | 0.981 | D | 0.673 | neutral | None | None | None | None | N |
C/R | 0.6386 | likely_pathogenic | 0.6265 | pathogenic | -1.246 | Destabilizing | 0.927 | D | 0.665 | neutral | N | 0.49388508 | None | None | N |
C/S | 0.437 | ambiguous | 0.4065 | ambiguous | -1.808 | Destabilizing | 0.784 | D | 0.583 | neutral | D | 0.526573502 | None | None | N |
C/T | 0.5813 | likely_pathogenic | 0.5353 | ambiguous | -1.504 | Destabilizing | 0.828 | D | 0.583 | neutral | None | None | None | None | N |
C/V | 0.4374 | ambiguous | 0.4088 | ambiguous | -1.109 | Destabilizing | 0.329 | N | 0.558 | neutral | None | None | None | None | N |
C/W | 0.4808 | ambiguous | 0.457 | ambiguous | -1.196 | Destabilizing | 0.975 | D | 0.632 | neutral | N | 0.491960207 | None | None | N |
C/Y | 0.2606 | likely_benign | 0.2465 | benign | -1.131 | Destabilizing | 0.01 | N | 0.433 | neutral | N | 0.397374467 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.