Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9159 | 27700;27701;27702 | chr2:178712447;178712446;178712445 | chr2:179577174;179577173;179577172 |
N2AB | 8842 | 26749;26750;26751 | chr2:178712447;178712446;178712445 | chr2:179577174;179577173;179577172 |
N2A | 7915 | 23968;23969;23970 | chr2:178712447;178712446;178712445 | chr2:179577174;179577173;179577172 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | None | N | 0.133 | 0.084 | 0.0401082797425 | gnomAD-4.0.0 | 1.59116E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85804E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1468 | likely_benign | 0.1615 | benign | -0.826 | Destabilizing | 0.016 | N | 0.391 | neutral | None | None | None | None | N |
N/C | 0.1885 | likely_benign | 0.2071 | benign | -0.153 | Destabilizing | 0.676 | D | 0.51 | neutral | None | None | None | None | N |
N/D | 0.1383 | likely_benign | 0.1436 | benign | -1.122 | Destabilizing | 0.024 | N | 0.318 | neutral | N | 0.51126012 | None | None | N |
N/E | 0.3064 | likely_benign | 0.3221 | benign | -1.025 | Destabilizing | 0.016 | N | 0.292 | neutral | None | None | None | None | N |
N/F | 0.2763 | likely_benign | 0.2985 | benign | -0.679 | Destabilizing | 0.214 | N | 0.527 | neutral | None | None | None | None | N |
N/G | 0.2107 | likely_benign | 0.2363 | benign | -1.157 | Destabilizing | 0.016 | N | 0.298 | neutral | None | None | None | None | N |
N/H | 0.0805 | likely_benign | 0.0799 | benign | -0.984 | Destabilizing | None | N | 0.141 | neutral | D | 0.522554549 | None | None | N |
N/I | 0.1176 | likely_benign | 0.1275 | benign | 0.012 | Stabilizing | 0.029 | N | 0.528 | neutral | N | 0.490367272 | None | None | N |
N/K | 0.2161 | likely_benign | 0.2347 | benign | -0.336 | Destabilizing | 0.001 | N | 0.164 | neutral | N | 0.492306213 | None | None | N |
N/L | 0.148 | likely_benign | 0.1519 | benign | 0.012 | Stabilizing | 0.006 | N | 0.441 | neutral | None | None | None | None | N |
N/M | 0.2153 | likely_benign | 0.2299 | benign | 0.528 | Stabilizing | 0.007 | N | 0.367 | neutral | None | None | None | None | N |
N/P | 0.7799 | likely_pathogenic | 0.7676 | pathogenic | -0.237 | Destabilizing | 0.136 | N | 0.553 | neutral | None | None | None | None | N |
N/Q | 0.2182 | likely_benign | 0.232 | benign | -1.1 | Destabilizing | 0.072 | N | 0.367 | neutral | None | None | None | None | N |
N/R | 0.2091 | likely_benign | 0.2251 | benign | -0.325 | Destabilizing | 0.038 | N | 0.287 | neutral | None | None | None | None | N |
N/S | 0.0641 | likely_benign | 0.0687 | benign | -0.991 | Destabilizing | None | N | 0.133 | neutral | N | 0.440552028 | None | None | N |
N/T | 0.0847 | likely_benign | 0.0919 | benign | -0.712 | Destabilizing | None | N | 0.139 | neutral | N | 0.508393173 | None | None | N |
N/V | 0.137 | likely_benign | 0.1443 | benign | -0.237 | Destabilizing | 0.038 | N | 0.481 | neutral | None | None | None | None | N |
N/W | 0.5815 | likely_pathogenic | 0.6144 | pathogenic | -0.472 | Destabilizing | 0.864 | D | 0.549 | neutral | None | None | None | None | N |
N/Y | 0.1124 | likely_benign | 0.12 | benign | -0.223 | Destabilizing | 0.093 | N | 0.541 | neutral | N | 0.502230557 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.