Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9166 | 27721;27722;27723 | chr2:178712426;178712425;178712424 | chr2:179577153;179577152;179577151 |
N2AB | 8849 | 26770;26771;26772 | chr2:178712426;178712425;178712424 | chr2:179577153;179577152;179577151 |
N2A | 7922 | 23989;23990;23991 | chr2:178712426;178712425;178712424 | chr2:179577153;179577152;179577151 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs773637100 | -0.337 | 0.996 | D | 0.641 | 0.457 | 0.739841096875 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
S/L | rs773637100 | -0.337 | 0.996 | D | 0.641 | 0.457 | 0.739841096875 | gnomAD-4.0.0 | 3.42096E-06 | None | None | None | None | N | None | 2.98775E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59778E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1171 | likely_benign | 0.1203 | benign | -0.918 | Destabilizing | 0.948 | D | 0.455 | neutral | N | 0.489251182 | None | None | N |
S/C | 0.2299 | likely_benign | 0.2052 | benign | -0.693 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
S/D | 0.7888 | likely_pathogenic | 0.8309 | pathogenic | -0.521 | Destabilizing | 0.992 | D | 0.631 | neutral | None | None | None | None | N |
S/E | 0.8071 | likely_pathogenic | 0.8436 | pathogenic | -0.472 | Destabilizing | 0.992 | D | 0.615 | neutral | None | None | None | None | N |
S/F | 0.347 | ambiguous | 0.3856 | ambiguous | -1.025 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
S/G | 0.2121 | likely_benign | 0.2222 | benign | -1.201 | Destabilizing | 0.992 | D | 0.497 | neutral | None | None | None | None | N |
S/H | 0.598 | likely_pathogenic | 0.6282 | pathogenic | -1.61 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
S/I | 0.3345 | likely_benign | 0.3543 | ambiguous | -0.255 | Destabilizing | 0.995 | D | 0.754 | deleterious | None | None | None | None | N |
S/K | 0.896 | likely_pathogenic | 0.919 | pathogenic | -0.576 | Destabilizing | 0.983 | D | 0.622 | neutral | None | None | None | None | N |
S/L | 0.1565 | likely_benign | 0.1653 | benign | -0.255 | Destabilizing | 0.996 | D | 0.641 | neutral | D | 0.533886263 | None | None | N |
S/M | 0.2654 | likely_benign | 0.2705 | benign | -0.056 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
S/N | 0.3053 | likely_benign | 0.3379 | benign | -0.717 | Destabilizing | 0.992 | D | 0.606 | neutral | None | None | None | None | N |
S/P | 0.9632 | likely_pathogenic | 0.9662 | pathogenic | -0.443 | Destabilizing | 0.999 | D | 0.771 | deleterious | N | 0.506825686 | None | None | N |
S/Q | 0.761 | likely_pathogenic | 0.7908 | pathogenic | -0.82 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
S/R | 0.8577 | likely_pathogenic | 0.8832 | pathogenic | -0.575 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
S/T | 0.0925 | likely_benign | 0.0987 | benign | -0.699 | Destabilizing | 0.37 | N | 0.389 | neutral | N | 0.461292659 | None | None | N |
S/V | 0.2994 | likely_benign | 0.3125 | benign | -0.443 | Destabilizing | 0.995 | D | 0.691 | prob.neutral | None | None | None | None | N |
S/W | 0.5715 | likely_pathogenic | 0.5728 | pathogenic | -1.002 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | N | 0.515726456 | None | None | N |
S/Y | 0.2668 | likely_benign | 0.2921 | benign | -0.703 | Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.