Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9179 | 27760;27761;27762 | chr2:178712387;178712386;178712385 | chr2:179577114;179577113;179577112 |
N2AB | 8862 | 26809;26810;26811 | chr2:178712387;178712386;178712385 | chr2:179577114;179577113;179577112 |
N2A | 7935 | 24028;24029;24030 | chr2:178712387;178712386;178712385 | chr2:179577114;179577113;179577112 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1377122264 | None | 0.002 | N | 0.319 | 0.245 | 0.509996732195 | gnomAD-4.0.0 | 8.89464E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.16928E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5332 | ambiguous | 0.4417 | ambiguous | -0.873 | Destabilizing | 0.824 | D | 0.511 | neutral | None | None | None | None | N |
A/D | 0.2791 | likely_benign | 0.2282 | benign | -0.674 | Destabilizing | 0.001 | N | 0.358 | neutral | None | None | None | None | N |
A/E | 0.2062 | likely_benign | 0.1721 | benign | -0.69 | Destabilizing | 0.062 | N | 0.518 | neutral | N | 0.519588815 | None | None | N |
A/F | 0.3265 | likely_benign | 0.243 | benign | -0.933 | Destabilizing | 0.555 | D | 0.59 | neutral | None | None | None | None | N |
A/G | 0.132 | likely_benign | 0.1185 | benign | -1.106 | Destabilizing | 0.027 | N | 0.466 | neutral | D | 0.533944978 | None | None | N |
A/H | 0.4817 | ambiguous | 0.397 | ambiguous | -1.243 | Destabilizing | 0.824 | D | 0.567 | neutral | None | None | None | None | N |
A/I | 0.2598 | likely_benign | 0.2002 | benign | -0.248 | Destabilizing | 0.081 | N | 0.501 | neutral | None | None | None | None | N |
A/K | 0.3844 | ambiguous | 0.3041 | benign | -1.002 | Destabilizing | 0.081 | N | 0.498 | neutral | None | None | None | None | N |
A/L | 0.2205 | likely_benign | 0.173 | benign | -0.248 | Destabilizing | 0.081 | N | 0.504 | neutral | None | None | None | None | N |
A/M | 0.2324 | likely_benign | 0.193 | benign | -0.246 | Destabilizing | 0.555 | D | 0.527 | neutral | None | None | None | None | N |
A/N | 0.2652 | likely_benign | 0.211 | benign | -0.762 | Destabilizing | 0.081 | N | 0.559 | neutral | None | None | None | None | N |
A/P | 0.7436 | likely_pathogenic | 0.6064 | pathogenic | -0.401 | Destabilizing | None | N | 0.288 | neutral | N | 0.52001887 | None | None | N |
A/Q | 0.303 | likely_benign | 0.2621 | benign | -0.862 | Destabilizing | 0.005 | N | 0.275 | neutral | None | None | None | None | N |
A/R | 0.3196 | likely_benign | 0.2582 | benign | -0.75 | Destabilizing | 0.235 | N | 0.532 | neutral | None | None | None | None | N |
A/S | 0.09 | likely_benign | 0.0823 | benign | -1.204 | Destabilizing | None | N | 0.345 | neutral | N | 0.458444355 | None | None | N |
A/T | 0.0944 | likely_benign | 0.0839 | benign | -1.109 | Destabilizing | 0.062 | N | 0.465 | neutral | D | 0.523823985 | None | None | N |
A/V | 0.1499 | likely_benign | 0.1245 | benign | -0.401 | Destabilizing | 0.002 | N | 0.319 | neutral | N | 0.5097882 | None | None | N |
A/W | 0.7081 | likely_pathogenic | 0.6002 | pathogenic | -1.277 | Destabilizing | 0.935 | D | 0.647 | neutral | None | None | None | None | N |
A/Y | 0.4259 | ambiguous | 0.3287 | benign | -0.847 | Destabilizing | 0.555 | D | 0.591 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.