Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9185 | 27778;27779;27780 | chr2:178712369;178712368;178712367 | chr2:179577096;179577095;179577094 |
N2AB | 8868 | 26827;26828;26829 | chr2:178712369;178712368;178712367 | chr2:179577096;179577095;179577094 |
N2A | 7941 | 24046;24047;24048 | chr2:178712369;178712368;178712367 | chr2:179577096;179577095;179577094 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1477423741 | -0.97 | 0.993 | N | 0.595 | 0.448 | 0.635940165184 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
Y/C | rs1477423741 | -0.97 | 0.993 | N | 0.595 | 0.448 | 0.635940165184 | gnomAD-4.0.0 | 1.59124E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85811E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.1987 | likely_benign | 0.2049 | benign | -2.378 | Highly Destabilizing | 0.176 | N | 0.443 | neutral | None | None | None | None | N |
Y/C | 0.0806 | likely_benign | 0.0772 | benign | -0.827 | Destabilizing | 0.993 | D | 0.595 | neutral | N | 0.508507816 | None | None | N |
Y/D | 0.0836 | likely_benign | 0.0879 | benign | -0.745 | Destabilizing | 0.27 | N | 0.494 | neutral | N | 0.496597312 | None | None | N |
Y/E | 0.2236 | likely_benign | 0.238 | benign | -0.681 | Destabilizing | 0.013 | N | 0.427 | neutral | None | None | None | None | N |
Y/F | 0.0744 | likely_benign | 0.0761 | benign | -1.176 | Destabilizing | 0.784 | D | 0.466 | neutral | N | 0.443688334 | None | None | N |
Y/G | 0.2731 | likely_benign | 0.2699 | benign | -2.677 | Highly Destabilizing | 0.329 | N | 0.508 | neutral | None | None | None | None | N |
Y/H | 0.0778 | likely_benign | 0.0825 | benign | -0.994 | Destabilizing | 0.006 | N | 0.171 | neutral | N | 0.432471262 | None | None | N |
Y/I | 0.1531 | likely_benign | 0.1584 | benign | -1.48 | Destabilizing | 0.828 | D | 0.555 | neutral | None | None | None | None | N |
Y/K | 0.3168 | likely_benign | 0.327 | benign | -0.927 | Destabilizing | 0.176 | N | 0.459 | neutral | None | None | None | None | N |
Y/L | 0.2056 | likely_benign | 0.2056 | benign | -1.48 | Destabilizing | 0.495 | N | 0.415 | neutral | None | None | None | None | N |
Y/M | 0.3291 | likely_benign | 0.3278 | benign | -1.019 | Destabilizing | 0.981 | D | 0.523 | neutral | None | None | None | None | N |
Y/N | 0.0676 | likely_benign | 0.0719 | benign | -1.099 | Destabilizing | 0.425 | N | 0.499 | neutral | N | 0.457097561 | None | None | N |
Y/P | 0.939 | likely_pathogenic | 0.9242 | pathogenic | -1.773 | Destabilizing | 0.828 | D | 0.604 | neutral | None | None | None | None | N |
Y/Q | 0.1841 | likely_benign | 0.1973 | benign | -1.133 | Destabilizing | 0.037 | N | 0.241 | neutral | None | None | None | None | N |
Y/R | 0.1928 | likely_benign | 0.2004 | benign | -0.369 | Destabilizing | 0.003 | N | 0.417 | neutral | None | None | None | None | N |
Y/S | 0.0735 | likely_benign | 0.0771 | benign | -1.715 | Destabilizing | 0.01 | N | 0.417 | neutral | N | 0.41059448 | None | None | N |
Y/T | 0.1474 | likely_benign | 0.1547 | benign | -1.56 | Destabilizing | 0.329 | N | 0.503 | neutral | None | None | None | None | N |
Y/V | 0.1316 | likely_benign | 0.1353 | benign | -1.773 | Destabilizing | 0.495 | N | 0.445 | neutral | None | None | None | None | N |
Y/W | 0.3692 | ambiguous | 0.363 | ambiguous | -0.731 | Destabilizing | 0.981 | D | 0.519 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.