Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9235 | 27928;27929;27930 | chr2:178712127;178712126;178712125 | chr2:179576854;179576853;179576852 |
N2AB | 8918 | 26977;26978;26979 | chr2:178712127;178712126;178712125 | chr2:179576854;179576853;179576852 |
N2A | 7991 | 24196;24197;24198 | chr2:178712127;178712126;178712125 | chr2:179576854;179576853;179576852 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | None | None | None | N | 0.381 | 0.153 | 0.187945064343 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0593 | likely_benign | 0.0661 | benign | -0.434 | Destabilizing | None | N | 0.072 | neutral | N | 0.370902729 | None | None | I |
G/C | 0.1433 | likely_benign | 0.1481 | benign | -0.847 | Destabilizing | 0.356 | N | 0.53 | neutral | None | None | None | None | I |
G/D | 0.1811 | likely_benign | 0.2231 | benign | -0.448 | Destabilizing | 0.072 | N | 0.447 | neutral | None | None | None | None | I |
G/E | 0.1318 | likely_benign | 0.1473 | benign | -0.478 | Destabilizing | 0.012 | N | 0.402 | neutral | N | 0.361011022 | None | None | I |
G/F | 0.2703 | likely_benign | 0.2991 | benign | -0.737 | Destabilizing | 0.214 | N | 0.582 | neutral | None | None | None | None | I |
G/H | 0.1902 | likely_benign | 0.2016 | benign | -0.893 | Destabilizing | 0.356 | N | 0.541 | neutral | None | None | None | None | I |
G/I | 0.0959 | likely_benign | 0.0969 | benign | -0.039 | Destabilizing | None | N | 0.373 | neutral | None | None | None | None | I |
G/K | 0.1608 | likely_benign | 0.175 | benign | -0.874 | Destabilizing | None | N | 0.254 | neutral | None | None | None | None | I |
G/L | 0.1541 | likely_benign | 0.1653 | benign | -0.039 | Destabilizing | 0.016 | N | 0.355 | neutral | None | None | None | None | I |
G/M | 0.1689 | likely_benign | 0.17 | benign | -0.3 | Destabilizing | 0.214 | N | 0.555 | neutral | None | None | None | None | I |
G/N | 0.1445 | likely_benign | 0.1645 | benign | -0.675 | Destabilizing | 0.038 | N | 0.343 | neutral | None | None | None | None | I |
G/P | 0.7247 | likely_pathogenic | 0.8423 | pathogenic | -0.129 | Destabilizing | 0.072 | N | 0.551 | neutral | None | None | None | None | I |
G/Q | 0.1537 | likely_benign | 0.1607 | benign | -0.74 | Destabilizing | 0.072 | N | 0.561 | neutral | None | None | None | None | I |
G/R | 0.1152 | likely_benign | 0.1286 | benign | -0.682 | Destabilizing | None | N | 0.348 | neutral | N | 0.357434786 | None | None | I |
G/S | 0.0639 | likely_benign | 0.0709 | benign | -0.987 | Destabilizing | None | N | 0.111 | neutral | None | None | None | None | I |
G/T | 0.0593 | likely_benign | 0.0642 | benign | -0.901 | Destabilizing | 0.016 | N | 0.381 | neutral | None | None | None | None | I |
G/V | 0.0734 | likely_benign | 0.0751 | benign | -0.129 | Destabilizing | None | N | 0.381 | neutral | N | 0.392355436 | None | None | I |
G/W | 0.2436 | likely_benign | 0.2778 | benign | -1.09 | Destabilizing | 0.828 | D | 0.553 | neutral | N | 0.453905327 | None | None | I |
G/Y | 0.2374 | likely_benign | 0.27 | benign | -0.622 | Destabilizing | 0.356 | N | 0.566 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.