Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9236 | 27931;27932;27933 | chr2:178712124;178712123;178712122 | chr2:179576851;179576850;179576849 |
N2AB | 8919 | 26980;26981;26982 | chr2:178712124;178712123;178712122 | chr2:179576851;179576850;179576849 |
N2A | 7992 | 24199;24200;24201 | chr2:178712124;178712123;178712122 | chr2:179576851;179576850;179576849 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1034794926 | None | 0.978 | D | 0.613 | 0.661 | 0.768130985018 | gnomAD-4.0.0 | 2.73685E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59788E-06 | 0 | 0 |
V/I | rs774989128 | -0.085 | 0.37 | N | 0.209 | 0.158 | None | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
V/I | rs774989128 | -0.085 | 0.37 | N | 0.209 | 0.158 | None | gnomAD-4.0.0 | 6.84216E-06 | None | None | None | None | I | None | 0 | 2.23664E-05 | None | 0 | 0 | None | 0 | 0 | 8.09529E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6561 | likely_pathogenic | 0.7575 | pathogenic | -1.475 | Destabilizing | 0.978 | D | 0.613 | neutral | D | 0.571531789 | None | None | I |
V/C | 0.9237 | likely_pathogenic | 0.9433 | pathogenic | -1.0 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
V/D | 0.9815 | likely_pathogenic | 0.9918 | pathogenic | -1.12 | Destabilizing | 0.999 | D | 0.846 | deleterious | None | None | None | None | I |
V/E | 0.9627 | likely_pathogenic | 0.9809 | pathogenic | -1.03 | Destabilizing | 0.999 | D | 0.852 | deleterious | D | 0.630117644 | None | None | I |
V/F | 0.4435 | ambiguous | 0.5629 | ambiguous | -0.927 | Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | I |
V/G | 0.802 | likely_pathogenic | 0.8775 | pathogenic | -1.886 | Destabilizing | 0.999 | D | 0.846 | deleterious | D | 0.630117644 | None | None | I |
V/H | 0.9835 | likely_pathogenic | 0.992 | pathogenic | -1.427 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
V/I | 0.076 | likely_benign | 0.0823 | benign | -0.414 | Destabilizing | 0.37 | N | 0.209 | neutral | N | 0.480694858 | None | None | I |
V/K | 0.9695 | likely_pathogenic | 0.9828 | pathogenic | -1.129 | Destabilizing | 0.999 | D | 0.854 | deleterious | None | None | None | None | I |
V/L | 0.4638 | ambiguous | 0.5493 | ambiguous | -0.414 | Destabilizing | 0.9 | D | 0.551 | neutral | D | 0.536253481 | None | None | I |
V/M | 0.4171 | ambiguous | 0.5151 | ambiguous | -0.407 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | I |
V/N | 0.9447 | likely_pathogenic | 0.9732 | pathogenic | -1.063 | Destabilizing | 0.999 | D | 0.86 | deleterious | None | None | None | None | I |
V/P | 0.951 | likely_pathogenic | 0.973 | pathogenic | -0.733 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | I |
V/Q | 0.9596 | likely_pathogenic | 0.9792 | pathogenic | -1.071 | Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | I |
V/R | 0.9574 | likely_pathogenic | 0.9763 | pathogenic | -0.827 | Destabilizing | 0.999 | D | 0.862 | deleterious | None | None | None | None | I |
V/S | 0.8541 | likely_pathogenic | 0.915 | pathogenic | -1.691 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | I |
V/T | 0.7202 | likely_pathogenic | 0.7958 | pathogenic | -1.463 | Destabilizing | 0.992 | D | 0.717 | prob.delet. | None | None | None | None | I |
V/W | 0.9777 | likely_pathogenic | 0.9901 | pathogenic | -1.2 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
V/Y | 0.9147 | likely_pathogenic | 0.9526 | pathogenic | -0.851 | Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.