Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9241 | 27946;27947;27948 | chr2:178712109;178712108;178712107 | chr2:179576836;179576835;179576834 |
N2AB | 8924 | 26995;26996;26997 | chr2:178712109;178712108;178712107 | chr2:179576836;179576835;179576834 |
N2A | 7997 | 24214;24215;24216 | chr2:178712109;178712108;178712107 | chr2:179576836;179576835;179576834 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs2154295843 | None | 0.994 | N | 0.539 | 0.288 | 0.298403945805 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92976E-04 | None | 0 | 0 | 0 | 0 | 0 |
G/E | rs2154295843 | None | 0.994 | N | 0.539 | 0.288 | 0.298403945805 | gnomAD-4.0.0 | 6.57056E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.93424E-04 | None | 0 | 0 | 0 | 0 | 0 |
G/V | None | None | 0.994 | N | 0.64 | 0.268 | 0.512192450023 | gnomAD-4.0.0 | 1.59129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2277 | likely_benign | 0.2595 | benign | -0.382 | Destabilizing | 0.198 | N | 0.252 | neutral | N | 0.475181024 | None | None | N |
G/C | 0.4725 | ambiguous | 0.5224 | ambiguous | -0.691 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
G/D | 0.2157 | likely_benign | 0.2999 | benign | -0.509 | Destabilizing | 0.99 | D | 0.491 | neutral | None | None | None | None | N |
G/E | 0.2615 | likely_benign | 0.2951 | benign | -0.562 | Destabilizing | 0.994 | D | 0.539 | neutral | N | 0.447743706 | None | None | N |
G/F | 0.8256 | likely_pathogenic | 0.8583 | pathogenic | -0.703 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
G/H | 0.5961 | likely_pathogenic | 0.6646 | pathogenic | -0.948 | Destabilizing | 0.999 | D | 0.582 | neutral | None | None | None | None | N |
G/I | 0.7237 | likely_pathogenic | 0.7759 | pathogenic | -0.033 | Destabilizing | 0.998 | D | 0.674 | neutral | None | None | None | None | N |
G/K | 0.5095 | ambiguous | 0.5522 | ambiguous | -0.921 | Destabilizing | 0.995 | D | 0.54 | neutral | None | None | None | None | N |
G/L | 0.6901 | likely_pathogenic | 0.7394 | pathogenic | -0.033 | Destabilizing | 0.995 | D | 0.637 | neutral | None | None | None | None | N |
G/M | 0.7178 | likely_pathogenic | 0.7559 | pathogenic | -0.14 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
G/N | 0.2884 | likely_benign | 0.3297 | benign | -0.64 | Destabilizing | 0.643 | D | 0.251 | neutral | None | None | None | None | N |
G/P | 0.9783 | likely_pathogenic | 0.988 | pathogenic | -0.107 | Destabilizing | 0.998 | D | 0.586 | neutral | None | None | None | None | N |
G/Q | 0.4526 | ambiguous | 0.4866 | ambiguous | -0.763 | Destabilizing | 0.998 | D | 0.597 | neutral | None | None | None | None | N |
G/R | 0.4153 | ambiguous | 0.4603 | ambiguous | -0.677 | Destabilizing | 0.997 | D | 0.585 | neutral | N | 0.507138726 | None | None | N |
G/S | 0.1679 | likely_benign | 0.2071 | benign | -0.93 | Destabilizing | 0.967 | D | 0.44 | neutral | None | None | None | None | N |
G/T | 0.4635 | ambiguous | 0.525 | ambiguous | -0.89 | Destabilizing | 0.995 | D | 0.541 | neutral | None | None | None | None | N |
G/V | 0.5348 | ambiguous | 0.609 | pathogenic | -0.107 | Destabilizing | 0.994 | D | 0.64 | neutral | N | 0.495268294 | None | None | N |
G/W | 0.6514 | likely_pathogenic | 0.7355 | pathogenic | -1.09 | Destabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
G/Y | 0.6304 | likely_pathogenic | 0.6993 | pathogenic | -0.626 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.