Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9242 | 27949;27950;27951 | chr2:178712106;178712105;178712104 | chr2:179576833;179576832;179576831 |
N2AB | 8925 | 26998;26999;27000 | chr2:178712106;178712105;178712104 | chr2:179576833;179576832;179576831 |
N2A | 7998 | 24217;24218;24219 | chr2:178712106;178712105;178712104 | chr2:179576833;179576832;179576831 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | rs746470885 | 0.133 | 1.0 | N | 0.552 | 0.388 | 0.530409124356 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.66E-05 | 0 |
D/Y | rs746470885 | 0.133 | 1.0 | N | 0.552 | 0.388 | 0.530409124356 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
D/Y | rs746470885 | 0.133 | 1.0 | N | 0.552 | 0.388 | 0.530409124356 | gnomAD-4.0.0 | 5.08171E-05 | None | None | None | None | N | None | 1.33518E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 6.78087E-05 | 0 | 1.60138E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.249 | likely_benign | 0.3048 | benign | 0.022 | Stabilizing | 0.989 | D | 0.421 | neutral | N | 0.462720006 | None | None | N |
D/C | 0.7761 | likely_pathogenic | 0.8049 | pathogenic | -0.123 | Destabilizing | 1.0 | D | 0.583 | neutral | None | None | None | None | N |
D/E | 0.2257 | likely_benign | 0.2298 | benign | -0.28 | Destabilizing | 0.989 | D | 0.457 | neutral | N | 0.491763842 | None | None | N |
D/F | 0.6357 | likely_pathogenic | 0.6949 | pathogenic | -0.027 | Destabilizing | 1.0 | D | 0.553 | neutral | None | None | None | None | N |
D/G | 0.2124 | likely_benign | 0.2434 | benign | -0.093 | Destabilizing | 0.217 | N | 0.307 | neutral | N | 0.440961302 | None | None | N |
D/H | 0.3728 | ambiguous | 0.4357 | ambiguous | 0.579 | Stabilizing | 1.0 | D | 0.46 | neutral | N | 0.462239481 | None | None | N |
D/I | 0.4671 | ambiguous | 0.5345 | ambiguous | 0.257 | Stabilizing | 1.0 | D | 0.575 | neutral | None | None | None | None | N |
D/K | 0.4472 | ambiguous | 0.4938 | ambiguous | 0.484 | Stabilizing | 0.998 | D | 0.467 | neutral | None | None | None | None | N |
D/L | 0.5032 | ambiguous | 0.5698 | pathogenic | 0.257 | Stabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
D/M | 0.6856 | likely_pathogenic | 0.7208 | pathogenic | 0.063 | Stabilizing | 1.0 | D | 0.574 | neutral | None | None | None | None | N |
D/N | 0.1002 | likely_benign | 0.1088 | benign | 0.182 | Stabilizing | 0.733 | D | 0.328 | neutral | N | 0.453168169 | None | None | N |
D/P | 0.735 | likely_pathogenic | 0.7935 | pathogenic | 0.198 | Stabilizing | 1.0 | D | 0.465 | neutral | None | None | None | None | N |
D/Q | 0.4477 | ambiguous | 0.481 | ambiguous | 0.198 | Stabilizing | 0.999 | D | 0.449 | neutral | None | None | None | None | N |
D/R | 0.5027 | ambiguous | 0.5665 | pathogenic | 0.709 | Stabilizing | 0.999 | D | 0.471 | neutral | None | None | None | None | N |
D/S | 0.1696 | likely_benign | 0.1945 | benign | 0.104 | Stabilizing | 0.992 | D | 0.419 | neutral | None | None | None | None | N |
D/T | 0.3407 | ambiguous | 0.3794 | ambiguous | 0.206 | Stabilizing | 0.998 | D | 0.456 | neutral | None | None | None | None | N |
D/V | 0.3073 | likely_benign | 0.365 | ambiguous | 0.198 | Stabilizing | 0.999 | D | 0.565 | neutral | N | 0.478875705 | None | None | N |
D/W | 0.9266 | likely_pathogenic | 0.9427 | pathogenic | 0.023 | Stabilizing | 1.0 | D | 0.571 | neutral | None | None | None | None | N |
D/Y | 0.2689 | likely_benign | 0.3243 | benign | 0.201 | Stabilizing | 1.0 | D | 0.552 | neutral | N | 0.475988869 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.