Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC924227949;27950;27951 chr2:178712106;178712105;178712104chr2:179576833;179576832;179576831
N2AB892526998;26999;27000 chr2:178712106;178712105;178712104chr2:179576833;179576832;179576831
N2A799824217;24218;24219 chr2:178712106;178712105;178712104chr2:179576833;179576832;179576831
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: D
  • RefSeq wild type transcript codon: GAT
  • RefSeq wild type template codon: CTA
  • Domain: Ig-78
  • Domain position: 38
  • Structural Position: 52
  • Q(SASA): 0.8214
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
D/Y rs746470885 0.133 1.0 N 0.552 0.388 0.530409124356 gnomAD-2.1.1 1.21E-05 None None None None N None 0 0 None 0 0 None 0 None 0 2.66E-05 0
D/Y rs746470885 0.133 1.0 N 0.552 0.388 0.530409124356 gnomAD-3.1.2 1.97E-05 None None None None N None 0 0 0 0 0 None 0 0 4.41E-05 0 0
D/Y rs746470885 0.133 1.0 N 0.552 0.388 0.530409124356 gnomAD-4.0.0 5.08171E-05 None None None None N None 1.33518E-05 0 None 0 0 None 0 0 6.78087E-05 0 1.60138E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
D/A 0.249 likely_benign 0.3048 benign 0.022 Stabilizing 0.989 D 0.421 neutral N 0.462720006 None None N
D/C 0.7761 likely_pathogenic 0.8049 pathogenic -0.123 Destabilizing 1.0 D 0.583 neutral None None None None N
D/E 0.2257 likely_benign 0.2298 benign -0.28 Destabilizing 0.989 D 0.457 neutral N 0.491763842 None None N
D/F 0.6357 likely_pathogenic 0.6949 pathogenic -0.027 Destabilizing 1.0 D 0.553 neutral None None None None N
D/G 0.2124 likely_benign 0.2434 benign -0.093 Destabilizing 0.217 N 0.307 neutral N 0.440961302 None None N
D/H 0.3728 ambiguous 0.4357 ambiguous 0.579 Stabilizing 1.0 D 0.46 neutral N 0.462239481 None None N
D/I 0.4671 ambiguous 0.5345 ambiguous 0.257 Stabilizing 1.0 D 0.575 neutral None None None None N
D/K 0.4472 ambiguous 0.4938 ambiguous 0.484 Stabilizing 0.998 D 0.467 neutral None None None None N
D/L 0.5032 ambiguous 0.5698 pathogenic 0.257 Stabilizing 0.999 D 0.565 neutral None None None None N
D/M 0.6856 likely_pathogenic 0.7208 pathogenic 0.063 Stabilizing 1.0 D 0.574 neutral None None None None N
D/N 0.1002 likely_benign 0.1088 benign 0.182 Stabilizing 0.733 D 0.328 neutral N 0.453168169 None None N
D/P 0.735 likely_pathogenic 0.7935 pathogenic 0.198 Stabilizing 1.0 D 0.465 neutral None None None None N
D/Q 0.4477 ambiguous 0.481 ambiguous 0.198 Stabilizing 0.999 D 0.449 neutral None None None None N
D/R 0.5027 ambiguous 0.5665 pathogenic 0.709 Stabilizing 0.999 D 0.471 neutral None None None None N
D/S 0.1696 likely_benign 0.1945 benign 0.104 Stabilizing 0.992 D 0.419 neutral None None None None N
D/T 0.3407 ambiguous 0.3794 ambiguous 0.206 Stabilizing 0.998 D 0.456 neutral None None None None N
D/V 0.3073 likely_benign 0.365 ambiguous 0.198 Stabilizing 0.999 D 0.565 neutral N 0.478875705 None None N
D/W 0.9266 likely_pathogenic 0.9427 pathogenic 0.023 Stabilizing 1.0 D 0.571 neutral None None None None N
D/Y 0.2689 likely_benign 0.3243 benign 0.201 Stabilizing 1.0 D 0.552 neutral N 0.475988869 None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.