Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9251 | 27976;27977;27978 | chr2:178712079;178712078;178712077 | chr2:179576806;179576805;179576804 |
N2AB | 8934 | 27025;27026;27027 | chr2:178712079;178712078;178712077 | chr2:179576806;179576805;179576804 |
N2A | 8007 | 24244;24245;24246 | chr2:178712079;178712078;178712077 | chr2:179576806;179576805;179576804 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs2076738638 | None | None | N | 0.201 | 0.174 | 0.382592752248 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 4.78927E-04 |
Y/C | rs2076738638 | None | None | N | 0.201 | 0.174 | 0.382592752248 | gnomAD-4.0.0 | 3.0447E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.2049E-06 | 0 | 6.80596E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.2153 | likely_benign | 0.2925 | benign | -2.661 | Highly Destabilizing | 0.002 | N | 0.321 | neutral | None | None | None | None | N |
Y/C | 0.055 | likely_benign | 0.0774 | benign | -1.645 | Destabilizing | None | N | 0.201 | neutral | N | 0.521074469 | None | None | N |
Y/D | 0.3735 | ambiguous | 0.5571 | ambiguous | -2.298 | Highly Destabilizing | 0.014 | N | 0.447 | neutral | D | 0.535158487 | None | None | N |
Y/E | 0.5671 | likely_pathogenic | 0.7194 | pathogenic | -2.114 | Highly Destabilizing | 0.009 | N | 0.353 | neutral | None | None | None | None | N |
Y/F | 0.0856 | likely_benign | 0.1173 | benign | -0.908 | Destabilizing | None | N | 0.195 | neutral | N | 0.50471815 | None | None | N |
Y/G | 0.2334 | likely_benign | 0.2943 | benign | -3.079 | Highly Destabilizing | 0.009 | N | 0.355 | neutral | None | None | None | None | N |
Y/H | 0.1484 | likely_benign | 0.2382 | benign | -1.609 | Destabilizing | 0.196 | N | 0.489 | neutral | N | 0.495426663 | None | None | N |
Y/I | 0.2606 | likely_benign | 0.3828 | ambiguous | -1.315 | Destabilizing | 0.009 | N | 0.315 | neutral | None | None | None | None | N |
Y/K | 0.54 | ambiguous | 0.6714 | pathogenic | -1.804 | Destabilizing | 0.009 | N | 0.369 | neutral | None | None | None | None | N |
Y/L | 0.3169 | likely_benign | 0.385 | ambiguous | -1.315 | Destabilizing | 0.001 | N | 0.297 | neutral | None | None | None | None | N |
Y/M | 0.3964 | ambiguous | 0.4833 | ambiguous | -1.133 | Destabilizing | 0.002 | N | 0.252 | neutral | None | None | None | None | N |
Y/N | 0.1525 | likely_benign | 0.201 | benign | -2.452 | Highly Destabilizing | 0.017 | N | 0.484 | neutral | N | 0.494281293 | None | None | N |
Y/P | 0.8359 | likely_pathogenic | 0.895 | pathogenic | -1.772 | Destabilizing | 0.085 | N | 0.553 | neutral | None | None | None | None | N |
Y/Q | 0.3356 | likely_benign | 0.4688 | ambiguous | -2.214 | Highly Destabilizing | 0.001 | N | 0.208 | neutral | None | None | None | None | N |
Y/R | 0.3428 | ambiguous | 0.4679 | ambiguous | -1.576 | Destabilizing | 0.022 | N | 0.5 | neutral | None | None | None | None | N |
Y/S | 0.095 | likely_benign | 0.1279 | benign | -2.949 | Highly Destabilizing | None | N | 0.234 | neutral | D | 0.522343905 | None | None | N |
Y/T | 0.1882 | likely_benign | 0.2667 | benign | -2.642 | Highly Destabilizing | None | N | 0.223 | neutral | None | None | None | None | N |
Y/V | 0.1756 | likely_benign | 0.2473 | benign | -1.772 | Destabilizing | None | N | 0.15 | neutral | None | None | None | None | N |
Y/W | 0.3102 | likely_benign | 0.4563 | ambiguous | -0.297 | Destabilizing | 0.245 | N | 0.495 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.