Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9259 | 28000;28001;28002 | chr2:178712055;178712054;178712053 | chr2:179576782;179576781;179576780 |
N2AB | 8942 | 27049;27050;27051 | chr2:178712055;178712054;178712053 | chr2:179576782;179576781;179576780 |
N2A | 8015 | 24268;24269;24270 | chr2:178712055;178712054;178712053 | chr2:179576782;179576781;179576780 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs2076736013 | None | 0.001 | N | 0.256 | 0.108 | 0.425148423609 | gnomAD-4.0.0 | 6.36511E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.14334E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2312 | likely_benign | 0.3611 | ambiguous | -1.692 | Destabilizing | 0.004 | N | 0.371 | neutral | D | 0.527842938 | None | None | N |
V/C | 0.803 | likely_pathogenic | 0.8593 | pathogenic | -1.128 | Destabilizing | 0.968 | D | 0.659 | neutral | None | None | None | None | N |
V/D | 0.433 | ambiguous | 0.5805 | pathogenic | -2.006 | Highly Destabilizing | 0.667 | D | 0.742 | deleterious | N | 0.495615877 | None | None | N |
V/E | 0.3013 | likely_benign | 0.3735 | ambiguous | -1.985 | Destabilizing | 0.726 | D | 0.696 | prob.neutral | None | None | None | None | N |
V/F | 0.1984 | likely_benign | 0.2653 | benign | -1.342 | Destabilizing | 0.497 | N | 0.697 | prob.neutral | N | 0.496252621 | None | None | N |
V/G | 0.418 | ambiguous | 0.5747 | pathogenic | -2.037 | Highly Destabilizing | 0.497 | N | 0.681 | prob.neutral | N | 0.463082171 | None | None | N |
V/H | 0.6155 | likely_pathogenic | 0.7145 | pathogenic | -1.676 | Destabilizing | 0.968 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/I | 0.0663 | likely_benign | 0.0698 | benign | -0.82 | Destabilizing | 0.001 | N | 0.256 | neutral | N | 0.478030194 | None | None | N |
V/K | 0.408 | ambiguous | 0.503 | ambiguous | -1.36 | Destabilizing | 0.726 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/L | 0.2481 | likely_benign | 0.3179 | benign | -0.82 | Destabilizing | 0.02 | N | 0.481 | neutral | N | 0.505467511 | None | None | N |
V/M | 0.1289 | likely_benign | 0.1687 | benign | -0.593 | Destabilizing | 0.567 | D | 0.596 | neutral | None | None | None | None | N |
V/N | 0.3312 | likely_benign | 0.4456 | ambiguous | -1.212 | Destabilizing | 0.89 | D | 0.741 | deleterious | None | None | None | None | N |
V/P | 0.9735 | likely_pathogenic | 0.9899 | pathogenic | -1.078 | Destabilizing | 0.726 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/Q | 0.3796 | ambiguous | 0.4603 | ambiguous | -1.386 | Destabilizing | 0.89 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/R | 0.38 | ambiguous | 0.4691 | ambiguous | -0.861 | Destabilizing | 0.726 | D | 0.741 | deleterious | None | None | None | None | N |
V/S | 0.2908 | likely_benign | 0.3956 | ambiguous | -1.696 | Destabilizing | 0.396 | N | 0.655 | neutral | None | None | None | None | N |
V/T | 0.1494 | likely_benign | 0.1951 | benign | -1.573 | Destabilizing | 0.272 | N | 0.579 | neutral | None | None | None | None | N |
V/W | 0.8309 | likely_pathogenic | 0.9037 | pathogenic | -1.618 | Destabilizing | 0.968 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/Y | 0.5728 | likely_pathogenic | 0.6504 | pathogenic | -1.314 | Destabilizing | 0.726 | D | 0.7 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.