Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9261 | 28006;28007;28008 | chr2:178712049;178712048;178712047 | chr2:179576776;179576775;179576774 |
N2AB | 8944 | 27055;27056;27057 | chr2:178712049;178712048;178712047 | chr2:179576776;179576775;179576774 |
N2A | 8017 | 24274;24275;24276 | chr2:178712049;178712048;178712047 | chr2:179576776;179576775;179576774 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.625 | D | 0.45 | 0.295 | 0.255777322467 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0987 | likely_benign | 0.1293 | benign | -1.004 | Destabilizing | 0.625 | D | 0.45 | neutral | D | 0.530099384 | None | None | N |
T/C | 0.4178 | ambiguous | 0.5204 | ambiguous | -0.731 | Destabilizing | 0.016 | N | 0.297 | neutral | None | None | None | None | N |
T/D | 0.6166 | likely_pathogenic | 0.7083 | pathogenic | -1.718 | Destabilizing | 0.974 | D | 0.538 | neutral | None | None | None | None | N |
T/E | 0.4299 | ambiguous | 0.5296 | ambiguous | -1.513 | Destabilizing | 0.842 | D | 0.503 | neutral | None | None | None | None | N |
T/F | 0.2457 | likely_benign | 0.3531 | ambiguous | -0.551 | Destabilizing | 0.991 | D | 0.637 | neutral | None | None | None | None | N |
T/G | 0.4024 | ambiguous | 0.4934 | ambiguous | -1.424 | Destabilizing | 0.915 | D | 0.557 | neutral | None | None | None | None | N |
T/H | 0.3051 | likely_benign | 0.4095 | ambiguous | -1.64 | Destabilizing | 0.993 | D | 0.62 | neutral | None | None | None | None | N |
T/I | 0.1619 | likely_benign | 0.2269 | benign | 0.102 | Stabilizing | 0.966 | D | 0.535 | neutral | D | 0.530062098 | None | None | N |
T/K | 0.3356 | likely_benign | 0.4339 | ambiguous | -0.66 | Destabilizing | 0.669 | D | 0.501 | neutral | D | 0.536139922 | None | None | N |
T/L | 0.118 | likely_benign | 0.1626 | benign | 0.102 | Stabilizing | 0.842 | D | 0.521 | neutral | None | None | None | None | N |
T/M | 0.097 | likely_benign | 0.125 | benign | 0.035 | Stabilizing | 0.991 | D | 0.552 | neutral | None | None | None | None | N |
T/N | 0.184 | likely_benign | 0.2418 | benign | -1.372 | Destabilizing | 0.842 | D | 0.476 | neutral | None | None | None | None | N |
T/P | 0.83 | likely_pathogenic | 0.9028 | pathogenic | -0.235 | Destabilizing | 0.989 | D | 0.549 | neutral | N | 0.519377441 | None | None | N |
T/Q | 0.3015 | likely_benign | 0.3938 | ambiguous | -1.077 | Destabilizing | 0.949 | D | 0.549 | neutral | None | None | None | None | N |
T/R | 0.25 | likely_benign | 0.3576 | ambiguous | -0.947 | Destabilizing | 0.012 | N | 0.285 | neutral | N | 0.469685643 | None | None | N |
T/S | 0.1209 | likely_benign | 0.1412 | benign | -1.495 | Destabilizing | 0.801 | D | 0.494 | neutral | N | 0.457620423 | None | None | N |
T/V | 0.1303 | likely_benign | 0.168 | benign | -0.235 | Destabilizing | 0.842 | D | 0.453 | neutral | None | None | None | None | N |
T/W | 0.6532 | likely_pathogenic | 0.7711 | pathogenic | -0.844 | Destabilizing | 0.998 | D | 0.653 | neutral | None | None | None | None | N |
T/Y | 0.2995 | likely_benign | 0.4073 | ambiguous | -0.436 | Destabilizing | 0.991 | D | 0.637 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.