Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9264 | 28015;28016;28017 | chr2:178712040;178712039;178712038 | chr2:179576767;179576766;179576765 |
N2AB | 8947 | 27064;27065;27066 | chr2:178712040;178712039;178712038 | chr2:179576767;179576766;179576765 |
N2A | 8020 | 24283;24284;24285 | chr2:178712040;178712039;178712038 | chr2:179576767;179576766;179576765 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/C | None | None | 0.999 | N | 0.839 | 0.665 | 0.8456673461 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9557 | likely_pathogenic | 0.9786 | pathogenic | -2.576 | Highly Destabilizing | 0.863 | D | 0.719 | prob.delet. | None | None | None | None | N |
F/C | 0.6586 | likely_pathogenic | 0.8348 | pathogenic | -1.979 | Destabilizing | 0.999 | D | 0.839 | deleterious | N | 0.512635356 | None | None | N |
F/D | 0.9959 | likely_pathogenic | 0.9979 | pathogenic | -2.977 | Highly Destabilizing | 0.997 | D | 0.846 | deleterious | None | None | None | None | N |
F/E | 0.9943 | likely_pathogenic | 0.9974 | pathogenic | -2.727 | Highly Destabilizing | 0.997 | D | 0.817 | deleterious | None | None | None | None | N |
F/G | 0.9856 | likely_pathogenic | 0.9935 | pathogenic | -3.068 | Highly Destabilizing | 0.99 | D | 0.806 | deleterious | None | None | None | None | N |
F/H | 0.9565 | likely_pathogenic | 0.9766 | pathogenic | -1.96 | Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
F/I | 0.2736 | likely_benign | 0.4095 | ambiguous | -0.969 | Destabilizing | 0.704 | D | 0.577 | neutral | N | 0.350411947 | None | None | N |
F/K | 0.9905 | likely_pathogenic | 0.9954 | pathogenic | -2.037 | Highly Destabilizing | 0.997 | D | 0.814 | deleterious | None | None | None | None | N |
F/L | 0.8482 | likely_pathogenic | 0.9144 | pathogenic | -0.969 | Destabilizing | 0.005 | N | 0.276 | neutral | N | 0.409668974 | None | None | N |
F/M | 0.6706 | likely_pathogenic | 0.7778 | pathogenic | -0.974 | Destabilizing | 0.982 | D | 0.691 | prob.neutral | None | None | None | None | N |
F/N | 0.9823 | likely_pathogenic | 0.9908 | pathogenic | -2.618 | Highly Destabilizing | 0.997 | D | 0.85 | deleterious | None | None | None | None | N |
F/P | 0.9986 | likely_pathogenic | 0.9994 | pathogenic | -1.518 | Destabilizing | 0.997 | D | 0.851 | deleterious | None | None | None | None | N |
F/Q | 0.985 | likely_pathogenic | 0.9931 | pathogenic | -2.427 | Highly Destabilizing | 0.997 | D | 0.848 | deleterious | None | None | None | None | N |
F/R | 0.9762 | likely_pathogenic | 0.9889 | pathogenic | -1.835 | Destabilizing | 0.997 | D | 0.852 | deleterious | None | None | None | None | N |
F/S | 0.9534 | likely_pathogenic | 0.9783 | pathogenic | -3.266 | Highly Destabilizing | 0.959 | D | 0.769 | deleterious | N | 0.512381866 | None | None | N |
F/T | 0.9632 | likely_pathogenic | 0.9819 | pathogenic | -2.883 | Highly Destabilizing | 0.939 | D | 0.747 | deleterious | None | None | None | None | N |
F/V | 0.4277 | ambiguous | 0.5996 | pathogenic | -1.518 | Destabilizing | 0.061 | N | 0.495 | neutral | N | 0.452747747 | None | None | N |
F/W | 0.7782 | likely_pathogenic | 0.8441 | pathogenic | -0.204 | Destabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | N |
F/Y | 0.509 | ambiguous | 0.6086 | pathogenic | -0.618 | Destabilizing | 0.986 | D | 0.601 | neutral | N | 0.501114466 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.