Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9272 | 28039;28040;28041 | chr2:178712016;178712015;178712014 | chr2:179576743;179576742;179576741 |
N2AB | 8955 | 27088;27089;27090 | chr2:178712016;178712015;178712014 | chr2:179576743;179576742;179576741 |
N2A | 8028 | 24307;24308;24309 | chr2:178712016;178712015;178712014 | chr2:179576743;179576742;179576741 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 0.001 | N | 0.299 | 0.3 | 0.250039746154 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
S/T | rs763783812 | -0.565 | 0.081 | N | 0.427 | 0.116 | 0.180583059064 | gnomAD-2.1.1 | 2.81E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.96309E-04 | None | 0 | 8.87E-06 | 0 |
S/T | rs763783812 | -0.565 | 0.081 | N | 0.427 | 0.116 | 0.180583059064 | gnomAD-4.0.0 | 1.43693E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59809E-06 | 1.97179E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0778 | likely_benign | 0.0798 | benign | -0.751 | Destabilizing | 0.025 | N | 0.361 | neutral | None | None | None | None | N |
S/C | 0.146 | likely_benign | 0.1614 | benign | -0.469 | Destabilizing | 0.946 | D | 0.493 | neutral | D | 0.531085687 | None | None | N |
S/D | 0.4493 | ambiguous | 0.4763 | ambiguous | 0.079 | Stabilizing | 0.22 | N | 0.437 | neutral | None | None | None | None | N |
S/E | 0.5204 | ambiguous | 0.5148 | ambiguous | 0.053 | Stabilizing | 0.22 | N | 0.438 | neutral | None | None | None | None | N |
S/F | 0.2512 | likely_benign | 0.3008 | benign | -1.013 | Destabilizing | 0.667 | D | 0.542 | neutral | None | None | None | None | N |
S/G | 0.0931 | likely_benign | 0.1097 | benign | -0.969 | Destabilizing | None | N | 0.137 | neutral | N | 0.486697196 | None | None | N |
S/H | 0.3868 | ambiguous | 0.4163 | ambiguous | -1.418 | Destabilizing | 0.859 | D | 0.513 | neutral | None | None | None | None | N |
S/I | 0.1503 | likely_benign | 0.1629 | benign | -0.284 | Destabilizing | 0.001 | N | 0.293 | neutral | N | 0.494370198 | None | None | N |
S/K | 0.5537 | ambiguous | 0.5669 | pathogenic | -0.587 | Destabilizing | 0.124 | N | 0.43 | neutral | None | None | None | None | N |
S/L | 0.1104 | likely_benign | 0.1267 | benign | -0.284 | Destabilizing | 0.055 | N | 0.391 | neutral | None | None | None | None | N |
S/M | 0.1967 | likely_benign | 0.21 | benign | 0.013 | Stabilizing | 0.667 | D | 0.527 | neutral | None | None | None | None | N |
S/N | 0.1582 | likely_benign | 0.1777 | benign | -0.456 | Destabilizing | 0.175 | N | 0.441 | neutral | N | 0.502079199 | None | None | N |
S/P | 0.6159 | likely_pathogenic | 0.6718 | pathogenic | -0.407 | Destabilizing | 0.667 | D | 0.539 | neutral | None | None | None | None | N |
S/Q | 0.4814 | ambiguous | 0.4868 | ambiguous | -0.651 | Destabilizing | 0.497 | N | 0.505 | neutral | None | None | None | None | N |
S/R | 0.42 | ambiguous | 0.4646 | ambiguous | -0.461 | Destabilizing | 0.001 | N | 0.299 | neutral | N | 0.500104189 | None | None | N |
S/T | 0.079 | likely_benign | 0.0827 | benign | -0.563 | Destabilizing | 0.081 | N | 0.427 | neutral | N | 0.503411428 | None | None | N |
S/V | 0.1842 | likely_benign | 0.1929 | benign | -0.407 | Destabilizing | 0.004 | N | 0.301 | neutral | None | None | None | None | N |
S/W | 0.4325 | ambiguous | 0.516 | ambiguous | -0.941 | Destabilizing | 0.958 | D | 0.581 | neutral | None | None | None | None | N |
S/Y | 0.2468 | likely_benign | 0.2792 | benign | -0.691 | Destabilizing | 0.859 | D | 0.539 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.