Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9278 | 28057;28058;28059 | chr2:178711998;178711997;178711996 | chr2:179576725;179576724;179576723 |
N2AB | 8961 | 27106;27107;27108 | chr2:178711998;178711997;178711996 | chr2:179576725;179576724;179576723 |
N2A | 8034 | 24325;24326;24327 | chr2:178711998;178711997;178711996 | chr2:179576725;179576724;179576723 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | None | None | 0.781 | N | 0.824 | 0.334 | 0.529210848824 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6217 | likely_pathogenic | 0.7496 | pathogenic | -0.933 | Destabilizing | 0.399 | N | 0.62 | neutral | None | None | None | None | N |
K/C | 0.7214 | likely_pathogenic | 0.8403 | pathogenic | -1.114 | Destabilizing | 0.982 | D | 0.813 | deleterious | None | None | None | None | N |
K/D | 0.8956 | likely_pathogenic | 0.9387 | pathogenic | -0.616 | Destabilizing | 0.7 | D | 0.782 | deleterious | None | None | None | None | N |
K/E | 0.337 | likely_benign | 0.4529 | ambiguous | -0.466 | Destabilizing | 0.201 | N | 0.559 | neutral | N | 0.44544056 | None | None | N |
K/F | 0.8291 | likely_pathogenic | 0.9118 | pathogenic | -0.584 | Destabilizing | 0.947 | D | 0.819 | deleterious | None | None | None | None | N |
K/G | 0.7786 | likely_pathogenic | 0.8812 | pathogenic | -1.321 | Destabilizing | 0.7 | D | 0.765 | deleterious | None | None | None | None | N |
K/H | 0.3513 | ambiguous | 0.4453 | ambiguous | -1.644 | Destabilizing | 0.947 | D | 0.779 | deleterious | None | None | None | None | N |
K/I | 0.3099 | likely_benign | 0.4734 | ambiguous | 0.097 | Stabilizing | 0.781 | D | 0.824 | deleterious | N | 0.462103523 | None | None | N |
K/L | 0.4356 | ambiguous | 0.5755 | pathogenic | 0.097 | Stabilizing | 0.7 | D | 0.765 | deleterious | None | None | None | None | N |
K/M | 0.2991 | likely_benign | 0.4343 | ambiguous | -0.046 | Destabilizing | 0.982 | D | 0.769 | deleterious | None | None | None | None | N |
K/N | 0.714 | likely_pathogenic | 0.8092 | pathogenic | -0.901 | Destabilizing | 0.638 | D | 0.677 | prob.neutral | D | 0.528461801 | None | None | N |
K/P | 0.988 | likely_pathogenic | 0.9954 | pathogenic | -0.218 | Destabilizing | 0.826 | D | 0.789 | deleterious | None | None | None | None | N |
K/Q | 0.1889 | likely_benign | 0.2551 | benign | -0.954 | Destabilizing | 0.468 | N | 0.673 | neutral | N | 0.503293998 | None | None | N |
K/R | 0.0756 | likely_benign | 0.0982 | benign | -0.815 | Destabilizing | 0.002 | N | 0.268 | neutral | N | 0.480995928 | None | None | N |
K/S | 0.6855 | likely_pathogenic | 0.7975 | pathogenic | -1.59 | Destabilizing | 0.399 | N | 0.613 | neutral | None | None | None | None | N |
K/T | 0.2877 | likely_benign | 0.4033 | ambiguous | -1.221 | Destabilizing | 0.638 | D | 0.729 | prob.delet. | N | 0.475358035 | None | None | N |
K/V | 0.3127 | likely_benign | 0.4759 | ambiguous | -0.218 | Destabilizing | 0.7 | D | 0.802 | deleterious | None | None | None | None | N |
K/W | 0.7679 | likely_pathogenic | 0.8999 | pathogenic | -0.446 | Destabilizing | 0.982 | D | 0.784 | deleterious | None | None | None | None | N |
K/Y | 0.7162 | likely_pathogenic | 0.8313 | pathogenic | -0.12 | Destabilizing | 0.826 | D | 0.819 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.