Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9291 | 28096;28097;28098 | chr2:178711959;178711958;178711957 | chr2:179576686;179576685;179576684 |
N2AB | 8974 | 27145;27146;27147 | chr2:178711959;178711958;178711957 | chr2:179576686;179576685;179576684 |
N2A | 8047 | 24364;24365;24366 | chr2:178711959;178711958;178711957 | chr2:179576686;179576685;179576684 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs754982924 | -0.986 | 0.003 | N | 0.204 | 0.222 | 0.607559715422 | gnomAD-2.1.1 | 1.25E-05 | None | None | None | None | I | None | 0 | 2.99E-05 | None | 0 | 0 | None | 0 | None | 0 | 1.84E-05 | 0 |
F/S | rs754982924 | -0.986 | 0.003 | N | 0.204 | 0.222 | 0.607559715422 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
F/S | rs754982924 | -0.986 | 0.003 | N | 0.204 | 0.222 | 0.607559715422 | gnomAD-4.0.0 | 1.04382E-05 | None | None | None | None | I | None | 0 | 1.72849E-05 | None | 0 | 0 | None | 0 | 0 | 1.21922E-05 | 0 | 5.78737E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.1842 | likely_benign | 0.2084 | benign | -1.425 | Destabilizing | 0.061 | N | 0.269 | neutral | None | None | None | None | I |
F/C | 0.1509 | likely_benign | 0.2383 | benign | -0.49 | Destabilizing | 0.921 | D | 0.531 | neutral | N | 0.47195237 | None | None | I |
F/D | 0.3581 | ambiguous | 0.3963 | ambiguous | 0.668 | Stabilizing | 0.418 | N | 0.534 | neutral | None | None | None | None | I |
F/E | 0.4222 | ambiguous | 0.4366 | ambiguous | 0.685 | Stabilizing | 0.228 | N | 0.453 | neutral | None | None | None | None | I |
F/G | 0.4252 | ambiguous | 0.4967 | ambiguous | -1.676 | Destabilizing | 0.129 | N | 0.424 | neutral | None | None | None | None | I |
F/H | 0.245 | likely_benign | 0.2582 | benign | -0.083 | Destabilizing | 0.001 | N | 0.156 | neutral | None | None | None | None | I |
F/I | 0.0687 | likely_benign | 0.0801 | benign | -0.739 | Destabilizing | 0.101 | N | 0.404 | neutral | N | 0.413346784 | None | None | I |
F/K | 0.383 | ambiguous | 0.3577 | ambiguous | -0.303 | Destabilizing | 0.129 | N | 0.421 | neutral | None | None | None | None | I |
F/L | 0.4022 | ambiguous | 0.4042 | ambiguous | -0.739 | Destabilizing | None | N | 0.12 | neutral | N | 0.420446115 | None | None | I |
F/M | 0.2158 | likely_benign | 0.2181 | benign | -0.511 | Destabilizing | 0.716 | D | 0.447 | neutral | None | None | None | None | I |
F/N | 0.2193 | likely_benign | 0.2198 | benign | -0.185 | Destabilizing | 0.228 | N | 0.482 | neutral | None | None | None | None | I |
F/P | 0.7089 | likely_pathogenic | 0.7873 | pathogenic | -0.951 | Destabilizing | 0.593 | D | 0.595 | neutral | None | None | None | None | I |
F/Q | 0.3455 | ambiguous | 0.352 | ambiguous | -0.27 | Destabilizing | 0.418 | N | 0.579 | neutral | None | None | None | None | I |
F/R | 0.2905 | likely_benign | 0.2917 | benign | 0.249 | Stabilizing | 0.001 | N | 0.289 | neutral | None | None | None | None | I |
F/S | 0.1145 | likely_benign | 0.1304 | benign | -1.023 | Destabilizing | 0.003 | N | 0.204 | neutral | N | 0.389736419 | None | None | I |
F/T | 0.1443 | likely_benign | 0.1455 | benign | -0.917 | Destabilizing | 0.129 | N | 0.421 | neutral | None | None | None | None | I |
F/V | 0.0685 | likely_benign | 0.0797 | benign | -0.951 | Destabilizing | 0.101 | N | 0.377 | neutral | N | 0.370345368 | None | None | I |
F/W | 0.3236 | likely_benign | 0.4094 | ambiguous | -0.23 | Destabilizing | 0.94 | D | 0.483 | neutral | None | None | None | None | I |
F/Y | 0.0921 | likely_benign | 0.1085 | benign | -0.298 | Destabilizing | 0.183 | N | 0.436 | neutral | N | 0.431471185 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.