Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9312 | 28159;28160;28161 | chr2:178711302;178711301;178711300 | chr2:179576029;179576028;179576027 |
N2AB | 8995 | 27208;27209;27210 | chr2:178711302;178711301;178711300 | chr2:179576029;179576028;179576027 |
N2A | 8068 | 24427;24428;24429 | chr2:178711302;178711301;178711300 | chr2:179576029;179576028;179576027 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.071 | N | 0.425 | 0.229 | 0.3349148499 | gnomAD-4.0.0 | 1.59332E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2279 | likely_benign | 0.2762 | benign | -0.799 | Destabilizing | 0.961 | D | 0.486 | neutral | N | 0.439605091 | None | None | N |
E/C | 0.9538 | likely_pathogenic | 0.9636 | pathogenic | -0.403 | Destabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | N |
E/D | 0.4429 | ambiguous | 0.4813 | ambiguous | -1.214 | Destabilizing | 0.961 | D | 0.492 | neutral | D | 0.534192908 | None | None | N |
E/F | 0.932 | likely_pathogenic | 0.9479 | pathogenic | -0.266 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/G | 0.2582 | likely_benign | 0.3094 | benign | -1.188 | Destabilizing | 0.071 | N | 0.425 | neutral | N | 0.444688411 | None | None | N |
E/H | 0.7834 | likely_pathogenic | 0.8135 | pathogenic | -0.576 | Destabilizing | 0.996 | D | 0.571 | neutral | None | None | None | None | N |
E/I | 0.6813 | likely_pathogenic | 0.7411 | pathogenic | 0.266 | Stabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
E/K | 0.3062 | likely_benign | 0.3894 | ambiguous | -0.542 | Destabilizing | 0.925 | D | 0.527 | neutral | D | 0.528363013 | None | None | N |
E/L | 0.7245 | likely_pathogenic | 0.7763 | pathogenic | 0.266 | Stabilizing | 0.991 | D | 0.656 | neutral | None | None | None | None | N |
E/M | 0.7024 | likely_pathogenic | 0.7503 | pathogenic | 0.721 | Stabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | N |
E/N | 0.5788 | likely_pathogenic | 0.6371 | pathogenic | -1.068 | Destabilizing | 0.996 | D | 0.59 | neutral | None | None | None | None | N |
E/P | 0.9682 | likely_pathogenic | 0.9844 | pathogenic | -0.067 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | N |
E/Q | 0.1902 | likely_benign | 0.2299 | benign | -0.904 | Destabilizing | 0.489 | N | 0.299 | neutral | N | 0.504659435 | None | None | N |
E/R | 0.4896 | ambiguous | 0.5886 | pathogenic | -0.324 | Destabilizing | 0.991 | D | 0.601 | neutral | None | None | None | None | N |
E/S | 0.4193 | ambiguous | 0.4863 | ambiguous | -1.393 | Destabilizing | 0.97 | D | 0.543 | neutral | None | None | None | None | N |
E/T | 0.4456 | ambiguous | 0.5185 | ambiguous | -1.062 | Destabilizing | 0.996 | D | 0.605 | neutral | None | None | None | None | N |
E/V | 0.3785 | ambiguous | 0.4436 | ambiguous | -0.067 | Destabilizing | 0.994 | D | 0.601 | neutral | N | 0.410202117 | None | None | N |
E/W | 0.986 | likely_pathogenic | 0.9903 | pathogenic | -0.043 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
E/Y | 0.8694 | likely_pathogenic | 0.8963 | pathogenic | -0.002 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.