Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9331 | 28216;28217;28218 | chr2:178711245;178711244;178711243 | chr2:179575972;179575971;179575970 |
N2AB | 9014 | 27265;27266;27267 | chr2:178711245;178711244;178711243 | chr2:179575972;179575971;179575970 |
N2A | 8087 | 24484;24485;24486 | chr2:178711245;178711244;178711243 | chr2:179575972;179575971;179575970 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.019 | None | 0.179 | 0.1 | 0.1749357433 | gnomAD-4.0.0 | 1.36836E-06 | None | None | None | None | I | None | 2.98757E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99457E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0724 | likely_benign | 0.0775 | benign | -0.665 | Destabilizing | 0.019 | N | 0.179 | neutral | None | None | None | None | I |
S/C | 0.159 | likely_benign | 0.1733 | benign | -0.499 | Destabilizing | 0.946 | D | 0.454 | neutral | None | None | None | None | I |
S/D | 0.171 | likely_benign | 0.2298 | benign | 0.386 | Stabilizing | 0.055 | N | 0.231 | neutral | None | None | None | None | I |
S/E | 0.1744 | likely_benign | 0.2443 | benign | 0.36 | Stabilizing | None | N | 0.097 | neutral | None | None | None | None | I |
S/F | 0.1352 | likely_benign | 0.1418 | benign | -1.171 | Destabilizing | 0.602 | D | 0.513 | neutral | None | None | None | None | I |
S/G | 0.0973 | likely_benign | 0.1143 | benign | -0.839 | Destabilizing | 0.104 | N | 0.241 | neutral | None | None | None | None | I |
S/H | 0.1555 | likely_benign | 0.1846 | benign | -1.196 | Destabilizing | 0.497 | N | 0.475 | neutral | None | None | None | None | I |
S/I | 0.1003 | likely_benign | 0.1168 | benign | -0.319 | Destabilizing | 0.124 | N | 0.411 | neutral | None | None | None | None | I |
S/K | 0.243 | likely_benign | 0.3405 | ambiguous | -0.341 | Destabilizing | 0.055 | N | 0.245 | neutral | None | None | None | None | I |
S/L | 0.0891 | likely_benign | 0.0875 | benign | -0.319 | Destabilizing | 0.055 | N | 0.328 | neutral | None | None | None | None | I |
S/M | 0.1432 | likely_benign | 0.1446 | benign | -0.264 | Destabilizing | 0.667 | D | 0.474 | neutral | None | None | None | None | I |
S/N | 0.0855 | likely_benign | 0.1027 | benign | -0.334 | Destabilizing | 0.104 | N | 0.242 | neutral | None | None | None | None | I |
S/P | 0.65 | likely_pathogenic | 0.7308 | pathogenic | -0.404 | Destabilizing | 0.301 | N | 0.421 | neutral | None | None | None | None | I |
S/Q | 0.2039 | likely_benign | 0.2589 | benign | -0.415 | Destabilizing | 0.001 | N | 0.127 | neutral | None | None | None | None | I |
S/R | 0.2013 | likely_benign | 0.2764 | benign | -0.253 | Destabilizing | 0.124 | N | 0.417 | neutral | None | None | None | None | I |
S/T | 0.0602 | likely_benign | 0.0664 | benign | -0.398 | Destabilizing | 0.001 | N | 0.131 | neutral | None | None | None | None | I |
S/V | 0.1154 | likely_benign | 0.1306 | benign | -0.404 | Destabilizing | None | N | 0.281 | neutral | None | None | None | None | I |
S/W | 0.2313 | likely_benign | 0.2857 | benign | -1.168 | Destabilizing | 0.958 | D | 0.478 | neutral | None | None | None | None | I |
S/Y | 0.1214 | likely_benign | 0.1393 | benign | -0.86 | Destabilizing | 0.602 | D | 0.547 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.