Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9337 | 28234;28235;28236 | chr2:178711227;178711226;178711225 | chr2:179575954;179575953;179575952 |
N2AB | 9020 | 27283;27284;27285 | chr2:178711227;178711226;178711225 | chr2:179575954;179575953;179575952 |
N2A | 8093 | 24502;24503;24504 | chr2:178711227;178711226;178711225 | chr2:179575954;179575953;179575952 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs757848062 | -0.134 | 0.998 | None | 0.434 | 0.354 | 0.0297737177859 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/E | rs757848062 | -0.134 | 0.998 | None | 0.434 | 0.354 | 0.0297737177859 | gnomAD-4.0.0 | 6.84175E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65645E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5411 | ambiguous | 0.6283 | pathogenic | -0.588 | Destabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | N |
D/C | 0.9365 | likely_pathogenic | 0.9439 | pathogenic | -0.222 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
D/E | 0.4644 | ambiguous | 0.5654 | pathogenic | -0.381 | Destabilizing | 0.998 | D | 0.434 | neutral | None | None | None | None | N |
D/F | 0.9157 | likely_pathogenic | 0.9361 | pathogenic | -0.23 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
D/G | 0.358 | ambiguous | 0.4275 | ambiguous | -0.845 | Destabilizing | 0.996 | D | 0.62 | neutral | None | None | None | None | N |
D/H | 0.7692 | likely_pathogenic | 0.8167 | pathogenic | -0.143 | Destabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | N |
D/I | 0.9016 | likely_pathogenic | 0.9262 | pathogenic | 0.067 | Stabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
D/K | 0.8657 | likely_pathogenic | 0.9084 | pathogenic | 0.002 | Stabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
D/L | 0.8569 | likely_pathogenic | 0.8966 | pathogenic | 0.067 | Stabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
D/M | 0.9357 | likely_pathogenic | 0.9509 | pathogenic | 0.28 | Stabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
D/N | 0.1665 | likely_benign | 0.1891 | benign | -0.448 | Destabilizing | 0.884 | D | 0.336 | neutral | None | None | None | None | N |
D/P | 0.9938 | likely_pathogenic | 0.9958 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | N |
D/Q | 0.7986 | likely_pathogenic | 0.863 | pathogenic | -0.368 | Destabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | N |
D/R | 0.8575 | likely_pathogenic | 0.904 | pathogenic | 0.271 | Stabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
D/S | 0.3562 | ambiguous | 0.4134 | ambiguous | -0.594 | Destabilizing | 0.997 | D | 0.582 | neutral | None | None | None | None | N |
D/T | 0.7572 | likely_pathogenic | 0.8011 | pathogenic | -0.381 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
D/V | 0.7384 | likely_pathogenic | 0.8 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
D/W | 0.9776 | likely_pathogenic | 0.9837 | pathogenic | 0.019 | Stabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
D/Y | 0.5559 | ambiguous | 0.6449 | pathogenic | 0.027 | Stabilizing | 1.0 | D | 0.628 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.