Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9344 | 28255;28256;28257 | chr2:178711206;178711205;178711204 | chr2:179575933;179575932;179575931 |
N2AB | 9027 | 27304;27305;27306 | chr2:178711206;178711205;178711204 | chr2:179575933;179575932;179575931 |
N2A | 8100 | 24523;24524;24525 | chr2:178711206;178711205;178711204 | chr2:179575933;179575932;179575931 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs1338895544 | 0.066 | 0.106 | None | 0.327 | 0.174 | 0.223146558224 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/R | rs1338895544 | 0.066 | 0.106 | None | 0.327 | 0.174 | 0.223146558224 | gnomAD-4.0.0 | 6.84182E-07 | None | None | None | None | N | None | 0 | 2.23604E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.149 | likely_benign | 0.1349 | benign | -0.242 | Destabilizing | 0.007 | N | 0.199 | neutral | None | None | None | None | N |
S/C | 0.1961 | likely_benign | 0.1751 | benign | -0.248 | Destabilizing | 0.828 | D | 0.265 | neutral | None | None | None | None | N |
S/D | 0.1661 | likely_benign | 0.204 | benign | -0.017 | Destabilizing | None | N | 0.087 | neutral | None | None | None | None | N |
S/E | 0.3597 | ambiguous | 0.4298 | ambiguous | -0.117 | Destabilizing | 0.016 | N | 0.285 | neutral | None | None | None | None | N |
S/F | 0.2712 | likely_benign | 0.2504 | benign | -0.814 | Destabilizing | 0.628 | D | 0.267 | neutral | None | None | None | None | N |
S/G | 0.0823 | likely_benign | 0.0735 | benign | -0.349 | Destabilizing | None | N | 0.083 | neutral | None | None | None | None | N |
S/H | 0.2071 | likely_benign | 0.2461 | benign | -0.824 | Destabilizing | 0.628 | D | 0.256 | neutral | None | None | None | None | N |
S/I | 0.1904 | likely_benign | 0.1933 | benign | -0.092 | Destabilizing | 0.295 | N | 0.313 | neutral | None | None | None | None | N |
S/K | 0.4805 | ambiguous | 0.5713 | pathogenic | -0.547 | Destabilizing | 0.072 | N | 0.222 | neutral | None | None | None | None | N |
S/L | 0.1634 | likely_benign | 0.1391 | benign | -0.092 | Destabilizing | 0.072 | N | 0.296 | neutral | None | None | None | None | N |
S/M | 0.253 | likely_benign | 0.2447 | benign | 0.099 | Stabilizing | 0.628 | D | 0.265 | neutral | None | None | None | None | N |
S/N | 0.1112 | likely_benign | 0.1099 | benign | -0.235 | Destabilizing | 0.012 | N | 0.283 | neutral | None | None | None | None | N |
S/P | 0.7213 | likely_pathogenic | 0.774 | pathogenic | -0.114 | Destabilizing | 0.136 | N | 0.328 | neutral | None | None | None | None | N |
S/Q | 0.3838 | ambiguous | 0.4398 | ambiguous | -0.498 | Destabilizing | 0.136 | N | 0.227 | neutral | None | None | None | None | N |
S/R | 0.429 | ambiguous | 0.5196 | ambiguous | -0.292 | Destabilizing | 0.106 | N | 0.327 | neutral | None | None | None | None | N |
S/T | 0.1312 | likely_benign | 0.1045 | benign | -0.328 | Destabilizing | 0.024 | N | 0.269 | neutral | None | None | None | None | N |
S/V | 0.2526 | likely_benign | 0.2406 | benign | -0.114 | Destabilizing | 0.136 | N | 0.304 | neutral | None | None | None | None | N |
S/W | 0.4318 | ambiguous | 0.4383 | ambiguous | -0.851 | Destabilizing | 0.864 | D | 0.28 | neutral | None | None | None | None | N |
S/Y | 0.2008 | likely_benign | 0.2163 | benign | -0.571 | Destabilizing | 0.628 | D | 0.265 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.